Bi7420 Microarrays

Faculty of Science
Autumn 2011
Extent and Intensity
1/0. 1 credit(s) (plus extra credits for completion). Recommended Type of Completion: graded credit. Other types of completion: k (colloquium).
Teacher(s)
doc. Mgr. Martin Trbušek, Dr. (lecturer)
prof. RNDr. Šárka Pospíšilová, Ph.D. (lecturer)
RNDr. Jitka Malčíková, Ph.D. (lecturer)
MVDr. Boris Tichý, Ph.D. (lecturer)
prof. MUDr. Mgr. Marek Mráz, Ph.D. (lecturer)
Mgr. et Mgr. Veronika Oškerová, Ph.D. (assistant)
Guaranteed by
prof. RNDr. Jan Šmarda, CSc.
Department of Experimental Biology – Biology Section – Faculty of Science
Contact Person: RNDr. Jitka Malčíková, Ph.D.
Timetable
Thu 8:00–8:50 Kontaktujte učitele
Prerequisites (in Czech)
Bi1700 Cell Biology && ( Bi4010 Essential molecular biology || Bi4020 Molecular biology ) && ( Bi4020c Essential methods in mol. biol || Bi6400 Methods of molecular biology ) && Bi5000 Bioinformatics I
Course Enrolment Limitations
The course is also offered to the students of the fields other than those the course is directly associated with.
The capacity limit for the course is 20 student(s).
Current registration and enrolment status: enrolled: 0/20, only registered: 0/20, only registered with preference (fields directly associated with the programme): 0/20
fields of study / plans the course is directly associated with
there are 8 fields of study the course is directly associated with, display
Course objectives
Understand the principle of microarray technologies for genome, transcriptome and proteome analyses; understand the statistical approaches for processing of microarray data.
Syllabus
  • 1. Technological aspects of microarrays 2. Expression microarrays 3. arrayCGH 4. SNP arrays 5. Resequencing microarrays 6. Microarrays for analysis of methylation status, ChIP on chip 7. Protein, cell and tissue microarrays 8. Statistical methods in microarray processing 9. Using of microarray technology in molecular biology and molecular oncology. 10. Research strategy for using of microarray technology 11. Next generation sequencing in genome analysis
Literature
  • Čipové technologie v onkologickém výzkumu a praxi. Klinická onkologie 2006. Supplement 2
Teaching methods
Lectures
Assessment methods
Written test
Language of instruction
Czech
Further Comments
Study Materials
The course is taught annually.
The course is also listed under the following terms Autumn 2010 - only for the accreditation, Autumn 2010, Autumn 2011 - acreditation, Autumn 2012, Autumn 2013, Autumn 2014, Autumn 2015, Autumn 2016, autumn 2017, Autumn 2018, Autumn 2019, Autumn 2020, autumn 2021, Autumn 2022, Autumn 2023, Autumn 2024.
  • Enrolment Statistics (Autumn 2011, recent)
  • Permalink: https://is.muni.cz/course/sci/autumn2011/Bi7420