1
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* Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score   P(N) N
sp|P08506|DACC_ECOLI PENICILLIN-BINDING PROTEIN 6 PRECURS... 894 5.0e-120 1 sp|P38422|DACF_BACSU PENICILLIN-BINDING DACF PROTEIN PREC...      209    5.0e-47 3
sp|P28271|IREB_MOUSE IRON-RESPONSIVE ELEMENT BINDING PROT... 59 0.9996 1 sp|P31571|CAIA_ECOLI PROBABLE CARNITINE OPERON OXIDOREDUC...        48    0.9998 2
D. Alignments
>sp|P08506|DACC_ECOLI PENICILLIN-BINDING PROTEIN 6 PRECURSOR
(D-ALANYL-D-ALANINE CARBOXYPEPTIDASE FRACTION C)  (EC 3.4.16.4)
(DD-PEPTIDASE)   (DD-CARBOXYPEPTIDASE) (PBP-6). Length = 400
Score = 894 (409.5 bits), Expect = 5.0e-120, P = 5.0e-120 Identities = 169/342 (49%), Positives = 237/3 42 (69%)
Query: 1 MDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPV 60
MDY +G++L    GN    ++ +PASLTK+MT YVV +A+ + +I      D+VTVG+DAWA NP Sbjct:        45 MDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGNPA 104
Query:        61 FVGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHL 120
GSS+MFLK GD+VSV DL++G+I+ SGNDAC+ALADY+AG Q    F+ +MN YA+KL L Sbjct:      105 LRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAKKLGL 164
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EBI - Hinxton