|
|||||||||
| PREV CLASS NEXT CLASS | FRAMES NO FRAMES | ||||||||
| SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD | ||||||||
java.lang.Objectedu.cmu.cs.sb.core.GoAnnotations.GoRec
public static class GoAnnotations.GoRec
Stores GO enrichment results for one category
| Field Summary | |
|---|---|
double |
dcategoryall
The number of genes in the category |
double |
dcategoryselect
The number of genes in the category and in the set of interest |
double |
dcorrectedpvalue
The corrected actual size based p-value |
double |
dcorrectedpvaluebinom
The corrected expected size based p-value |
double |
dpvalue
The uncorrected actual size based p-value |
double |
dpvaluebinom
The uncorrected expected size based p-value |
java.lang.String |
szgocategory
The name of the category |
java.lang.String |
szgoid
The ID of the category |
| Constructor Summary | |
|---|---|
GoAnnotations.GoRec(double dcategoryselect,
double dcategoryall,
double dpvalue,
java.lang.String szgocategory,
java.lang.String szgoid)
Constructor without expected size based p-value |
|
| Method Summary | |
|---|---|
void |
print()
Prints the contents of all the variables in the record |
| Methods inherited from class java.lang.Object |
|---|
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
| Field Detail |
|---|
public double dcategoryselect
public double dcategoryall
public double dpvalue
public double dpvaluebinom
public java.lang.String szgoid
public java.lang.String szgocategory
public double dcorrectedpvalue
public double dcorrectedpvaluebinom
| Constructor Detail |
|---|
public GoAnnotations.GoRec(double dcategoryselect,
double dcategoryall,
double dpvalue,
java.lang.String szgocategory,
java.lang.String szgoid)
| Method Detail |
|---|
public void print()
|
|||||||||
| PREV CLASS NEXT CLASS | FRAMES NO FRAMES | ||||||||
| SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD | ||||||||