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java.lang.Objectedu.cmu.cs.sb.core.GoAnnotations.ProfileGORankingRec
public static class GoAnnotations.ProfileGORankingRec
Stores info about a profile's ranking according to the current order by criteria
| Field Summary | |
|---|---|
double |
dclusterpval
cluster enrichment p-value |
double |
dgenes
Number of genes that are selected and belong to the profile |
double |
dgenescluster
Number of genes that are selected and belong to the cluster |
double |
dgenestotal
Number of genes that are selected |
double |
dmaxselect
Number of genes that belong to the profile; max that could be selected in profile |
double |
dmaxselectcluster
Number of genes that belong to the cluster; max that could be selected in cluster |
double |
dmaxselecttotal
Total number of genes; max that could be selected |
double |
dpval
profile enrichment p-value |
int |
ncluster
Cluster profile belongs to, non-significant profiles have the greatest cluster value |
int |
nprofile
profile id |
| Constructor Summary | |
|---|---|
GoAnnotations.ProfileGORankingRec(int nprofile,
int ncluster,
double dpval,
double dclusterpval,
double dgenes,
double dmaxselect,
double dgenescluster,
double dmaxselectcluster,
double dgenestotal,
double dmaxselecttotal)
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| Method Summary |
|---|
| Methods inherited from class java.lang.Object |
|---|
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
| Field Detail |
|---|
public int nprofile
public int ncluster
public double dpval
public double dclusterpval
public double dgenes
public double dmaxselect
public double dgenescluster
public double dmaxselectcluster
public double dgenestotal
public double dmaxselecttotal
| Constructor Detail |
|---|
public GoAnnotations.ProfileGORankingRec(int nprofile,
int ncluster,
double dpval,
double dclusterpval,
double dgenes,
double dmaxselect,
double dgenescluster,
double dmaxselectcluster,
double dgenestotal,
double dmaxselecttotal)
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