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java.lang.Objectedu.cmu.cs.sb.core.GoAnnotations.ProfileGORankingRec
public static class GoAnnotations.ProfileGORankingRec
Stores info about a profile's ranking according to the current order by criteria
Field Summary | |
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double |
dclusterpval
cluster enrichment p-value |
double |
dgenes
Number of genes that are selected and belong to the profile |
double |
dgenescluster
Number of genes that are selected and belong to the cluster |
double |
dgenestotal
Number of genes that are selected |
double |
dmaxselect
Number of genes that belong to the profile; max that could be selected in profile |
double |
dmaxselectcluster
Number of genes that belong to the cluster; max that could be selected in cluster |
double |
dmaxselecttotal
Total number of genes; max that could be selected |
double |
dpval
profile enrichment p-value |
int |
ncluster
Cluster profile belongs to, non-significant profiles have the greatest cluster value |
int |
nprofile
profile id |
Constructor Summary | |
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GoAnnotations.ProfileGORankingRec(int nprofile,
int ncluster,
double dpval,
double dclusterpval,
double dgenes,
double dmaxselect,
double dgenescluster,
double dmaxselectcluster,
double dgenestotal,
double dmaxselecttotal)
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Method Summary |
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Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Field Detail |
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public int nprofile
public int ncluster
public double dpval
public double dclusterpval
public double dgenes
public double dmaxselect
public double dgenescluster
public double dmaxselectcluster
public double dgenestotal
public double dmaxselecttotal
Constructor Detail |
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public GoAnnotations.ProfileGORankingRec(int nprofile, int ncluster, double dpval, double dclusterpval, double dgenes, double dmaxselect, double dgenescluster, double dmaxselectcluster, double dgenestotal, double dmaxselecttotal)
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