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java.lang.Objectedu.cmu.cs.sb.core.GoAnnotations.GoRec
public static class GoAnnotations.GoRec
Stores GO enrichment results for one category
Field Summary | |
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double |
dcategoryall
The number of genes in the category |
double |
dcategoryselect
The number of genes in the category and in the set of interest |
double |
dcorrectedpvalue
The corrected actual size based p-value |
double |
dcorrectedpvaluebinom
The corrected expected size based p-value |
double |
dpvalue
The uncorrected actual size based p-value |
double |
dpvaluebinom
The uncorrected expected size based p-value |
java.lang.String |
szgocategory
The name of the category |
java.lang.String |
szgoid
The ID of the category |
Constructor Summary | |
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GoAnnotations.GoRec(double dcategoryselect,
double dcategoryall,
double dpvalue,
java.lang.String szgocategory,
java.lang.String szgoid)
Constructor without expected size based p-value |
Method Summary | |
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void |
print()
Prints the contents of all the variables in the record |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Field Detail |
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public double dcategoryselect
public double dcategoryall
public double dpvalue
public double dpvaluebinom
public java.lang.String szgoid
public java.lang.String szgocategory
public double dcorrectedpvalue
public double dcorrectedpvaluebinom
Constructor Detail |
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public GoAnnotations.GoRec(double dcategoryselect, double dcategoryall, double dpvalue, java.lang.String szgocategory, java.lang.String szgoid)
Method Detail |
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public void print()
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