Výpočetní metody v bioinformatice a systémové biologii
doc. Ing. Matej Lexa, Ph.D.
Výpočetní metody v bioinformatice a systémové biologii
doc. Ing. Matej Lexa, Ph.D.
Výpočetní metody v bioinformatice a systémové biologii
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Course
Term
Spring 2019
OSNOVA A ZÁKLADNÍ INFORMACE KURZU
Open
Chapter contains:
1
Study text
Teacher recommends to study from 18/2/2019 to 24/2/2019.
Týden 1 - UCSC Genome Browser - uvod
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Chapter contains:
2
PDF
1
Study Materials
5
Web
Teacher recommends to study from 19/2/2019 to 26/2/2019.
Týden 2 - UCSC Genome Browser - cvičení a další funkce, import dat do R
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Chapter contains:
2
PDF
1
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10
Web
Teacher recommends to study from 27/2/2019 to 5/3/2019.
Týden 3 - UCSC a Ensembl Genome Browser - programovatelne dotazy a zber dat
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Chapter contains:
1
Study text
4
Web
Teacher recommends to study from 6/3/2019 to 12/3/2019.
Týden 4 - Markovovy modely v bioinformatice - teorie
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Chapter contains:
1
PDF
1
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1
Study text
1
Web
Teacher recommends to study from 14/3/2016 to 20/3/2016.
Týden 5 - Markovovy modely v bioinformatice - profilove HMM
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Chapter contains:
1
PDF
1
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4
Web
Teacher recommends to study from 21/3/2016 to 27/3/2016.
Týden 6 - Markovovy modely v bioinformatice - programy HMMER
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Chapter contains:
1
PDF
1
Study text
8
Web
Teacher recommends to study from 28/3/2016 to 3/4/2016.
Sekvenační data - nanopore
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Chapter contains:
4
Web
Teacher recommends to study from 2/4/2019 to 8/4/2019.

Týden 7 - Interakční sítě a databáze znalostí
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Chapter contains:
1
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1
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5
Web
Teacher recommends to study from 1/4/2019 to 7/4/2019.


Týden 8 - Integrace dat
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1
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2
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Teacher recommends to study from 9/4/2019 to 16/4/2019.
Týden 9 - Data genové exprese a jejich integrace
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Chapter contains:
3
Study Materials
1
Study text
3
Web
Teacher recommends to study from 16/4/2019 to 23/4/2019.
Týden 10 - Analýza expresních profilů
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Chapter contains:
4
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1
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3
Web
Teacher recommends to study from 23/4/2019 to 1/5/2019.
Týden 11 - Bayesovské a boolovské sítě
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Chapter contains:
3
Study Materials
1
Study text
1
Web
Teacher recommends to study from 2/5/2019 to 21/5/2019.
Týden 12 - Boolovské sítě
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Chapter contains:
1
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4
Web
Teacher recommends to study from 14/5/2019 to 21/5/2019.
Týden 13 - Pokročilá analýza boolovských sítí
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Chapter contains:
1
Study text
1
Web
Teacher recommends to study from 16/5/2016 to 29/5/2016.
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