Progression through the study plan
doctoral full-time specialized, language of instruction: English
Included in the programme: LF D-MIKRO_A Medical Microbiology, Immunology and Pathology
Study-related information
- Final state examination and dissertation defenceThis requirement applies only to Ph.D. students who started their studies before March 2025:
Ph.D. candidates have to undergo the State Doctoral Examination before the thesis defence.
The State Doctoral Examination consist of: DOPLNIT
For the Ph.D. candidates who started their studies after March 1st, 2025, in connection with the amendment to the Higher Education Act, the state doctoral examination is abolished. However, due to the programme's multidisciplinary nature, the doctoral board of the doctoral degree programme will verify that the student possesses in-depth knowledge of the subject under study (concerning the dissertation topic and research) during the thesis debate and defence.
DOCTORAL THESIS DEFENCE:
Before the defence of the doctoral thesis is performed, the following conditions have to be met:
• fulfil the requirements of the given individual study plan
• complete at least 4 core courses, each from a different field of study
• complete at least 4 field-specific courses
• meet the publication activity requirements at least in the specified range
• undergo an internship abroad (with a duration of at least 30 days)
• present original data at an international conference (poster or oral talk)
• submit the doctoral thesis
• pass the final state doctoral examination (the requirement applies only to students who started their studies before March 2025)
• acquire the total amount of 240 credits over the course of studies
Thesis defence procedure
The defence includes:
• A 15-minute presentation of the dissertation thesis by the student.
• Presentation of opponents' reports and the student’s responses to the questions raised.
• A public discussion.
• A non-public vote by the Thesis Defence Committee. - Proposal of dissertation topics and topics of defended dissertationsPrognostic immunohistochemistry of soft tissue sarcomas
archiv: http://is.muni.cz/th/h651e/
Identification of cancer stem cells in selected childhood tumors
Archiv: http://is.muni.cz/th/azhy8/
Correlation between prenatal diagnosis and findings of fetal autopsy
Archiv: http://is.muni.cz/th/crv71/
Analysis of the nestin expresion in pancreatic ductal adenocarcinoma
Archiv: http://is.muni.cz/th/d8gdq/
Post-mortem diagnosis of anaphylaxis after bee stings
Study and research obligations
- Doctoral thesis
The main activity of a Ph.D. student is the continuous work on the thesis project, completed with the dissertation thesis defence. It includes:
- creating a literature review of the thesis,
- data collections,
- statistical evaluation,
- sample processing,
- data analysis and interpretation,
- presentation of results, etc.
In the dissertation thesis, the student presents the results of the scientific work achieved during his/her doctoral studies. The thesis itself must fulfil the following standards regulated by the Dean's Directive No. 5/2021, in brief:
- 60–100 standard pages
- Original results, either already published or accepted for publication
- A collection of already published papers, including a comprehensive introduction to the addressed topic and a summarising commentary
- If submitting the results of a collective scientific work, the parts the student has worked on must be marked. In this case, the thesis must be accompanied by a statement from the supervisor confirming and evaluating his/her authorship and contribution.
Students enrolled in the English Ph.D. programme submit their thesis in English. In contrast, students enrolled in the Czech Ph.D. programme are recommended to submit their thesis in English as well (in line with the faculty’s efforts to internationalise doctoral studies). However, these students may also submit their dissertations in Czech and Slovak. The formal requirements for the dissertation thesis (such as obligatory and optional parts, typography, etc) are set in the official thesis template, available on the faculty server.
- Publications
Minimum requirements of the publication activity are:
- at least one first-author publication of an original paper in a journal with an IF, value above the median of the field (Q1 or Q2),
- or two original first-author publications in a journal with an IF, value in Q3 of the dissertation field.
- Participation in conferences and professional forumsEvery Ph.D. candidate presents original data at an international conference.
- Research internships and international cooperation
Conditions of internships are regulated by Directive No. 2/2024.
Every full-time Ph.D. candidate must spend an internship abroad for at least 30 days (stays of less than 7 days cannot be included in the cumulative length).
- Specialized courses and theoretical training
All students of doctoral degree programmes must complete at least four courses from the faculty-wide core courses taught in English only and at least four field-specific courses. The compulsory curriculum is divided into six thematic areas, with a focus on the development of scientific and soft skills and career options after a Ph.D., and a special focus on Ethics in Biomedical Research.
CORE COURSES: Common and compulsory to all doctoral study programmes (every Ph.D. candidate is obliged to select at least 4 courses from these thematic areas):
- FRESHERS: Skills for Research Careers (mandatory for all Ph.D. candidates)
- Ethics in Biomedical Research
- Acquisition of Scientific Information
- Clinical Data Analysis
- Planning, Organisation, and Evaluation of Clinical Trials
- Computer Network User
FIELD-SPECIFIC COURSES – aim to deepen the knowledge and skills in the studied scientific field and its methodology. The Doctoral Board or Doctoral Committee always determines the offer and the possible obligation to attend them. These may be methodological courses, regular seminars, or events recommended by the DB or supervisor and organised by professional societies.
An indicative list follows, the student will take at least 4 courses, depending on the specific topic of the dissertation:
- General pathology
- Special pathology 1, 2 – (theoretical preparation, according to organ systems)
- Practical pathology 1 – pathological anatomical autopsy, performance, interpretation of results, correlation with clinical findings, necropsy examination
- Practical pathology 2 – biopsy section: receipt, description and processing of material, interpretation of findings
- Basic histopathological methods: special staining, histochemistry, immunohistochemistry
- Molecular pathology
- Specialized study program - pathology (elective courses), at least one:
- Histology and embryology
- Morphometry, documentation (macro- and microphotography),
- Microscopic image analysis)
Participation in panel diagnostic discussions organized by other institutes on average 6 times a year is recommended. Participation in professional congresses and conferences: Czech National Congress, Czech-Slovak Congress, National Congress of Forensic Doctors, participation in events of the Sternberg Society, participation in events of the Association of Doctors in Brno
- Teaching skills
All Ph.D. candidates with a work contract at the FM MU are obliged to complete an online course Basics of Medical Education (with the final test), which covers the basic principles and concepts of education.
Ph.D. candidates without a work contract may complete the online course Basics of Medical Education. Voluntarily interested candidates should contact the Office for Qualifying Development.
A wide range of educational activities offered by the university's Centre for Competence Development is then available to all Ph.D. students.
Every full-time Ph.D. candidate participates in teaching, with a maximum of 150 hours in 4 years.
- Language competenciesStudents are expected to have a minimum C1 level of English. Doctoral studies at FM MU are conducted mainly in English to maximise internationalisation. All core courses are offered exclusively in English (except courses organised by the Czech Academy of Sciences). The proportion of foreign Ph.D. candidates in our Ph.D. school has been increasing; therefore the lingua franca of the entire school is English in all official and unofficial events.
- Study milestones
- At the end of the 2nd, 4th, and 6th semester each year: presentation of progress in own research, results to date, and plans for the next period before a committee composed of members of the subject committee.
- By the end of the 4th and 6th semester: presentation of results at a conference, in at least one case in the form of an oral presentation
- By the end of the 5th semester: submission of an English review of the dissertation topic to the supervisor and subsequently to the subject committee.
- By the end of the 7th semester: submission of a publication meeting the conditions for successful completion of doctoral studies to the editorial office of a journal.