Bi7920 Analysis of biological data

Faculty of Science
Spring 2008 - for the purpose of the accreditation
Extent and Intensity
0/2/0. 2 credit(s). Type of Completion: zk (examination).
Teacher(s)
Ing. Marek Brabec, Ph.D. (lecturer), prof. Mgr. Stanislav Pekár, Ph.D. (deputy)
prof. Mgr. Stanislav Pekár, Ph.D. (lecturer)
Guaranteed by
prof. Mgr. Stanislav Pekár, Ph.D.
Faculty of Science
Contact Person: prof. Mgr. Stanislav Pekár, Ph.D.
Prerequisites (in Czech)
Bi5040 Biostatistics - basic course
Course Enrolment Limitations
The course is also offered to the students of the fields other than those the course is directly associated with.
The capacity limit for the course is 20 student(s).
Current registration and enrolment status: enrolled: 0/20, only registered: 0/20, only registered with preference (fields directly associated with the programme): 0/20
fields of study / plans the course is directly associated with
Course objectives
This lecture aims to teach how to analyse biological data using modern univariate statistical methods, mainly Generalised LInear Models and Linear mIxed-Effect Models.
Syllabus
  • 1) Introduction: Statistical software. R environment. 2) Exploratory data analysis: Data frames. Types of data. Tables and graphs. Moments. 3) Esperimental design: Randomised. Nested. Split-plot. Latin squares. Pseudoreplication. 4) Statistical modeling. Distributions. 5) Analysis of data using normal distribution. 6) Analysis of data using gamma distribution. 7) Analysis of data using Poisson distribution. 8) Analysis of data using negative-binomial distribution. 9) Analysis of data using binomial distribution. 10) Analysis of data using binary distribution. 11) Survival analysis. 13) Mixed models: Transformations. Split-plot and nested design. Repeated measures.
Language of instruction
Czech
Further comments (probably available only in Czech)
The course can also be completed outside the examination period.
The course is taught annually.
Information on course enrolment limitations: výuku zajišťují jednotlivé katedry biologické sekce, před zápisem je nutno kontaktovat jednotlivé vyučující z biologických kateder
Listed among pre-requisites of other courses
The course is also listed under the following terms Spring 2011 - only for the accreditation, Autumn 2002, Spring 2007, Spring 2008, Spring 2009, Spring 2010, Spring 2011, Spring 2012, spring 2012 - acreditation, Spring 2013, Spring 2014, Spring 2015, Spring 2016, Spring 2017, spring 2018, Spring 2019, Spring 2020, Spring 2021, Spring 2022, Spring 2023, Spring 2024, Spring 2025.