| ŠPONER, Jiří, Xiaohui CANG and Thomas E CHEATHAM. Molecular dynamics simulations of G-DNA and perspectives on the simulation of nucleic acid structures. Methods. SAN DIEGO: ACADEMIC PRESS INC ELSEVIER SCIENCE, 2012, vol. 57, No 1, p. 25-39. ISSN 1046-2023. doi:10.1016/j.ymeth.2012.04.005. |
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@article{1076106,
author = {Šponer, Jiří and Cang, Xiaohui and Cheatham, Thomas E},
article_location = {SAN DIEGO},
article_number = {1},
doi = {http://dx.doi.org/10.1016/j.ymeth.2012.04.005},
keywords = {Molecular dynamics simulations; Guanine quadruplex; DNA ligand binding; Force field limitations; Force field development},
language = {eng},
issn = {1046-2023},
journal = {Methods},
title = {Molecular dynamics simulations of G-DNA and perspectives on the simulation of nucleic acid structures},
url = {http://www.sciencedirect.com/science/article/pii/S1046202312000941},
volume = {57},
year = {2012}
}
TY - JOUR
ID - 1076106
AU - Šponer, Jiří - Cang, Xiaohui - Cheatham, Thomas E
PY - 2012
TI - Molecular dynamics simulations of G-DNA and perspectives on the simulation of nucleic acid structures
JF - Methods
VL - 57
IS - 1
SP - 25-39
EP - 25-39
PB - ACADEMIC PRESS INC ELSEVIER SCIENCE
SN - 10462023
KW - Molecular dynamics simulations
KW - Guanine quadruplex
KW - DNA ligand binding
KW - Force field limitations
KW - Force field development
UR - http://www.sciencedirect.com/science/article/pii/S1046202312000941
L2 - http://www.sciencedirect.com/science/article/pii/S1046202312000941
N2 - The article reviews the application of biomolecular simulation methods to understand the structure, dynamics and interactions of nucleic acids with a focus on explicit solvent molecular dynamics simulations of guanine quadruplex (G-DNA and G-RNA) molecules. While primarily dealing with these exciting and highly relevant four-stranded systems, where recent and past simulations have provided several interesting results and novel insight into G-DNA structure, the review provides some general perspectives on the applicability of the simulation techniques to nucleic acids. (C) 2012 Elsevier Inc. All rights reserved.
ER -
ŠPONER, Jiří, Xiaohui CANG and Thomas E CHEATHAM. Molecular dynamics simulations of G-DNA and perspectives on the simulation of nucleic acid structures. \textit{Methods}. SAN DIEGO: ACADEMIC PRESS INC ELSEVIER SCIENCE, 2012, vol.~57, No~1, p.~25-39. ISSN~1046-2023. doi:10.1016/j.ymeth.2012.04.005.
|
