R 2013

CytoPacq v2.0

SVOBODA, David, Luděk MATYSKA and Vladimír ULMAN

Basic information

Original name

CytoPacq v2.0

Name in Czech

CytoPacq v2.0

Authors

SVOBODA, David (203 Czech Republic, guarantor, belonging to the institution), Luděk MATYSKA (203 Czech Republic, belonging to the institution) and Vladimír ULMAN (203 Czech Republic, belonging to the institution)

Edition

2013

Other information

Language

English

Type of outcome

Software

Field of Study

20200 2.2 Electrical engineering, Electronic engineering, Information engineering

Country of publisher

Czech Republic

Confidentiality degree

není předmětem státního či obchodního tajemství

References:

RIV identification code

RIV/00216224:14330/13:00066205

Organization unit

Faculty of Informatics

Keywords in English

simulation; on-line web interface

Technical parameters

Pro využití softwaru je nutné postupovat podle licence GNU GPL v3. Odpovědná osoba pro jednání: David Svoboda, Fakulta informatiky, Masarykova univerzita, Botanická 68a, Brno, 602 00, svoboda@mail.muni.cz, tel. 549494383

Tags

International impact
Změněno: 28/4/2014 02:10, RNDr. Pavel Šmerk, Ph.D.

Abstract

V originále

CytoPacq v2.0 is nontrivial extension of CytoPacq toolkit developed in 2009. Newly, the distribution of cell nuclei within the specimen can be controlled by the user. The phenomenon called uneven illumination is now based on extensive experimental measurements. The computational kernel, which is located on server-side, is now more robust and offer better communication user interface. Namely, the user is notified via e-mail if something important happens (simulation failure, simulation completed, waiting for user input). Moreover, the user can interrupt the computation. The application also offers sample large pre-generated image dataset (68 GB) which is free to use.

Links

GBP302/12/G157, research and development project
Name: Dynamika a organizace chromosomů během buněčného cyklu a při diferenciaci v normě a patologii
Investor: Czech Science Foundation