GORA, Artur Wiktor, Jan BREZOVSKÝ and Jiří DAMBORSKÝ. Gates of Enzymes. Chemical Reviews. 2013, vol. 113, No 8, p. 5871-5923. ISSN 0009-2665. Available from: https://dx.doi.org/10.1021/cr300384w.
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Basic information
Original name Gates of Enzymes.
Authors GORA, Artur Wiktor (616 Poland, belonging to the institution), Jan BREZOVSKÝ (203 Czech Republic, belonging to the institution) and Jiří DAMBORSKÝ (203 Czech Republic, guarantor, belonging to the institution).
Edition Chemical Reviews, 2013, 0009-2665.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 10600 1.6 Biological sciences
Country of publisher United States of America
Confidentiality degree is not subject to a state or trade secret
Impact factor Impact factor: 45.661
RIV identification code RIV/00216224:14310/13:00065828
Organization unit Faculty of Science
Doi http://dx.doi.org/10.1021/cr300384w
UT WoS 000323301200006
Keywords in English haloalkane dehalogenases
Tags AKR, rivok
Tags International impact, Reviewed
Changed by Changed by: Ing. Zdeňka Rašková, učo 140529. Changed: 29/4/2014 14:37.
Abstract
This review highlights the importance of gates in enzymes. The gates control substrate access to the active site and product release, restrict solvent access to specific protein regions, and synchronize processes occurring in distinct parts of the enzyme. Survey of 129 gates in 71 enzymes enabled a rigorous definition of gates and establishment of a new scheme for their classification. Gates were assigned to six distinct classes – wings, swinging doors, apertures, drawbridges, double drawbridges and shells. Presented are summary statistics describing the propensity of specific amino acid residues in particular gate classes. The proposed classification scheme provides guidance for the analysis and engineering of gates in biomolecular systems.
Links
ED0001/01/01, research and development projectName: CETOCOEN
GAP207/12/0775, research and development projectName: Strukturně-funkční vztahy haloalkan dehalogenas
Investor: Czech Science Foundation
GAP503/12/0572, research and development projectName: Konstrukce syntetické metabolické dráhy pro degradaci důležitého environmentálního polutantu proteinovým a metabolickým inženýrstvím
Investor: Czech Science Foundation
IAA401630901, research and development projectName: Evoluce substrátové specifity u enzymů aktivních s xenobiotickými látkami
Investor: Academy of Sciences of the Czech Republic, Evolution of substrate specificity in enzymes acting on xenobiotic compounds
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