| MAŠKA, Martin, Vladimír ULMAN, David SVOBODA, Pavel MATULA, Petr MATULA, Cristina EDERRA, Ainhoa URBIOLA, Tomás ESPAÑA, Subramanian VENKATESAN, Deepak M W BALAK, Pavel KARAS, Tereza BOLCKOVÁ, Markéta ŠTREITOVÁ, Craig CARTHEL, Stefano CORALUPPI, Nathalie HARDER, Karl ROHR, Klas E G MAGNUSSON, Joakim JALDÉN, Helen M BLAU, Oleh DZYUBACHYK, Pavel KŘÍŽEK, Guy M HAGEN, David PASTOR-ESCUREDO, Daniel JIMENEZ-CARRETERO, Maria J LEDESMA-CARBAYO, Arrate MUÑOZ-BARRUTIA, Erik MEIJERING, Michal KOZUBEK and Carlos ORTIZ-DE-SOLORZANO. A Benchmark for Comparison of Cell Tracking Algorithms. Bioinformatics. 2014, vol. 30, No 11, p. 1609-1617. ISSN 1367-4803. Available from: https://dx.doi.org/10.1093/bioinformatics/btu080. |
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@article{1139064,
author = {Maška, Martin and Ulman, Vladimír and Svoboda, David and Matula, Pavel and Matula, Petr and Ederra, Cristina and Urbiola, Ainhoa and España, Tomás and Venkatesan, Subramanian and Balak, Deepak M W and Karas, Pavel and Bolcková, Tereza and Štreitová, Markéta and Carthel, Craig and Coraluppi, Stefano and Harder, Nathalie and Rohr, Karl and Magnusson, Klas E G and Jaldén, Joakim and Blau, Helen M and Dzyubachyk, Oleh and Křížek, Pavel and Hagen, Guy M and PastorandEscuredo, David and JimenezandCarretero, Daniel and LedesmaandCarbayo, Maria J and MuñozandBarrutia, Arrate and Meijering, Erik and Kozubek, Michal and OrtizanddeandSolorzano, Carlos},
article_number = {11},
doi = {http://dx.doi.org/10.1093/bioinformatics/btu080},
keywords = {cell tracking; fluorescence microscopy},
language = {eng},
issn = {1367-4803},
journal = {Bioinformatics},
title = {A Benchmark for Comparison of Cell Tracking Algorithms},
url = {http://dx.doi.org/10.1093/bioinformatics/btu080},
volume = {30},
year = {2014}
}
TY - JOUR
ID - 1139064
AU - Maška, Martin - Ulman, Vladimír - Svoboda, David - Matula, Pavel - Matula, Petr - Ederra, Cristina - Urbiola, Ainhoa - España, Tomás - Venkatesan, Subramanian - Balak, Deepak M W - Karas, Pavel - Bolcková, Tereza - Štreitová, Markéta - Carthel, Craig - Coraluppi, Stefano - Harder, Nathalie - Rohr, Karl - Magnusson, Klas E G - Jaldén, Joakim - Blau, Helen M - Dzyubachyk, Oleh - Křížek, Pavel - Hagen, Guy M - Pastor-Escuredo, David - Jimenez-Carretero, Daniel - Ledesma-Carbayo, Maria J - Muñoz-Barrutia, Arrate - Meijering, Erik - Kozubek, Michal - Ortiz-de-Solorzano, Carlos
PY - 2014
TI - A Benchmark for Comparison of Cell Tracking Algorithms
JF - Bioinformatics
VL - 30
IS - 11
SP - 1609-1617
EP - 1609-1617
SN - 13674803
KW - cell tracking
KW - fluorescence microscopy
UR - http://dx.doi.org/10.1093/bioinformatics/btu080
N2 - Automatic tracking of cells in multidimensional time-lapse fluorescence microscopy is an important task in many biomedical applications. A novel framework for objective evaluation of cell tracking algorithms has been established under the auspices of the IEEE International Symposium on Biomedical Imaging 2013 Cell Tracking Challenge. In this article, we present the logistics, datasets, methods and results of the challenge and lay down the principles for future uses of this benchmark.
ER -
MAŠKA, Martin, Vladimír ULMAN, David SVOBODA, Pavel MATULA, Petr MATULA, Cristina EDERRA, Ainhoa URBIOLA, Tomás ESPAÑA, Subramanian VENKATESAN, Deepak M W BALAK, Pavel KARAS, Tereza BOLCKOVÁ, Markéta ŠTREITOVÁ, Craig CARTHEL, Stefano CORALUPPI, Nathalie HARDER, Karl ROHR, Klas E G MAGNUSSON, Joakim JALDÉN, Helen M BLAU, Oleh DZYUBACHYK, Pavel KŘÍŽEK, Guy M HAGEN, David PASTOR-ESCUREDO, Daniel JIMENEZ-CARRETERO, Maria J LEDESMA-CARBAYO, Arrate MUÑOZ-BARRUTIA, Erik MEIJERING, Michal KOZUBEK and Carlos ORTIZ-DE-SOLORZANO. A Benchmark for Comparison of Cell Tracking Algorithms. \textit{Bioinformatics}. 2014, vol.~30, No~11, p.~1609-1617. ISSN~1367-4803. Available from: https://dx.doi.org/10.1093/bioinformatics/btu080.
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