SOROKIN, Dmitry, Marco TEKTONIDIS, Karl ROHR and Pavel MATULA. NON-RIGID CONTOUR-BASED TEMPORAL REGISTRATION OF 2D CELL NUCLEI IMAGES USING THE NAVIER EQUATION. In IEEE International Symposium on Biomedical Imaging: Nano to Macro. Beijing: IEEE. p. 746-749. ISBN 978-1-4673-1959-1. doi:10.1109/ISBI.2014.6867978. 2014.
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Basic information
Original name NON-RIGID CONTOUR-BASED TEMPORAL REGISTRATION OF 2D CELL NUCLEI IMAGES USING THE NAVIER EQUATION
Authors SOROKIN, Dmitry (643 Russian Federation, guarantor, belonging to the institution), Marco TEKTONIDIS (276 Germany), Karl ROHR (276 Germany) and Pavel MATULA (203 Czech Republic, belonging to the institution).
Edition Beijing, IEEE International Symposium on Biomedical Imaging: Nano to Macro, p. 746-749, 4 pp. 2014.
Publisher IEEE
Other information
Original language English
Type of outcome Proceedings paper
Field of Study 20200 2.2 Electrical engineering, Electronic engineering, Information engineering
Country of publisher United States of America
Confidentiality degree is not subject to a state or trade secret
Publication form electronic version available online
RIV identification code RIV/00216224:14330/14:00073449
Organization unit Faculty of Informatics
ISBN 978-1-4673-1959-1
Doi http://dx.doi.org/10.1109/ISBI.2014.6867978
Keywords in English Biomedical image analysis; Image sequence analysis; Contour-based registration
Tags CBIA, cbia-web, firank_B
Changed by Changed by: RNDr. Pavel Šmerk, Ph.D., učo 3880. Changed: 27/2/2018 06:44.
Abstract
In live cell imaging it is essential to analyze the pure motion of subnuclear proteins without influence of the cell nucleus motion and deformation which is referred to as nucleus global motion. In this work, we propose a 2D contour-based image registration approach for compensation of the global motion of the nucleus. Compared to a previous contour-based approach, our approach employs an explicit rigid registration step to compensate the nucleus translation and rotation, it uses morphological contour matching for establishing more reliable correspondences between contours in consecutive frames, and utilizes the Navier equation for more realistically modeling the nucleus deformation. Our approach was successfully applied to real live cell microscopy image sequences and an experimental comparison with an existing contour-based registration method and an intensity-based registration method has been performed.
Links
CZ.1.07/2.3.00/30.0030, interní kód MUName: Rozvoj lidských zdrojů pro oblast buněčné biologie
Investor: Ministry of Education, Youth and Sports of the CR, 2.3 Human resources in research and development
GBP302/12/G157, research and development projectName: Dynamika a organizace chromosomů během buněčného cyklu a při diferenciaci v normě a patologii
Investor: Czech Science Foundation
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