| CHENOUARD, Nicolas, Ihor SMAL, Fabrice DE CHAUMONT, Martin MAŠKA, Ivo F SBALZARINI, Yuanhao GONG, Janick CARDINALE, Craig CARTHEL, Stefano CORALUPPI, Mark WINTER, Andrew R COHEN, William J GODINEZ, Karl ROHR, Yannis KALAIDZIDIS, Liang LIANG, James DUNCAN, Hongying SHEN, Yingke XU, Klas E G MAGNUSSON, Joakim JALDÉN, Helen M BLAU, Perrine PAUL-GILLOTEAUX, Philippe ROUDOT, Charles KERVRANN, François WAHARTE, Jean-Yves TINEVEZ, Spencer L SHORTE, Joost WILLEMSE, Katherine CELLER, Gilles P VAN WEZEL, Han-Wei DAN, Yuh-Show TSAI, Carlos ORTIZ-DE-SOLÓRZANO, Jean-Christophe OLIVO-MARIN and Erik MEIJERING. Objective Comparison of Particle Tracking Methods. Nature Methods. 2014, vol. 11, No 3, p. 281-289. ISSN 1548-7091. Available from: https://dx.doi.org/10.1038/nmeth.2808. |
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@article{1160075,
author = {Chenouard, Nicolas and Smal, Ihor and de Chaumont, Fabrice and Maška, Martin and Sbalzarini, Ivo F and Gong, Yuanhao and Cardinale, Janick and Carthel, Craig and Coraluppi, Stefano and Winter, Mark and Cohen, Andrew R and Godinez, William J and Rohr, Karl and Kalaidzidis, Yannis and Liang, Liang and Duncan, James and Shen, Hongying and Xu, Yingke and Magnusson, Klas E G and Jaldén, Joakim and Blau, Helen M and PaulandGilloteaux, Perrine and Roudot, Philippe and Kervrann, Charles and Waharte, François and Tinevez, JeanandYves and Shorte, Spencer L and Willemse, Joost and Celler, Katherine and van Wezel, Gilles P and Dan, HanandWei and Tsai, YuhandShow and OrtizanddeandSolórzano, Carlos and OlivoandMarin, JeanandChristophe and Meijering, Erik},
article_number = {3},
doi = {http://dx.doi.org/10.1038/nmeth.2808},
keywords = {Particle tracking;performance comparison;fluorescence microscopy},
language = {eng},
issn = {1548-7091},
journal = {Nature Methods},
title = {Objective Comparison of Particle Tracking Methods},
url = {http://dx.doi.org/10.1038/nmeth.2808},
volume = {11},
year = {2014}
}
TY - JOUR
ID - 1160075
AU - Chenouard, Nicolas - Smal, Ihor - de Chaumont, Fabrice - Maška, Martin - Sbalzarini, Ivo F - Gong, Yuanhao - Cardinale, Janick - Carthel, Craig - Coraluppi, Stefano - Winter, Mark - Cohen, Andrew R - Godinez, William J - Rohr, Karl - Kalaidzidis, Yannis - Liang, Liang - Duncan, James - Shen, Hongying - Xu, Yingke - Magnusson, Klas E G - Jaldén, Joakim - Blau, Helen M - Paul-Gilloteaux, Perrine - Roudot, Philippe - Kervrann, Charles - Waharte, François - Tinevez, Jean-Yves - Shorte, Spencer L - Willemse, Joost - Celler, Katherine - van Wezel, Gilles P - Dan, Han-Wei - Tsai, Yuh-Show - Ortiz-de-Solórzano, Carlos - Olivo-Marin, Jean-Christophe - Meijering, Erik
PY - 2014
TI - Objective Comparison of Particle Tracking Methods
JF - Nature Methods
VL - 11
IS - 3
SP - 281-289
EP - 281-289
SN - 15487091
KW - Particle tracking;performance comparison;fluorescence microscopy
UR - http://dx.doi.org/10.1038/nmeth.2808
N2 - Particle tracking is of key importance for quantitative analysis of intracellular dynamic processes from time-lapse microscopy image data. Because manually detecting and following large numbers of individual particles is not feasible, automated computational methods have been developed for these tasks by many groups. Aiming to perform an objective comparison of methods, we gathered the community and organized an open competition in which participating teams applied their own methods independently to a commonly defined data set including diverse scenarios. Performance was assessed using commonly defined measures. Although no single method performed best across all scenarios, the results revealed clear differences between the various approaches, leading to notable practical conclusions for users and developers.
ER -
CHENOUARD, Nicolas, Ihor SMAL, Fabrice DE CHAUMONT, Martin MAŠKA, Ivo F SBALZARINI, Yuanhao GONG, Janick CARDINALE, Craig CARTHEL, Stefano CORALUPPI, Mark WINTER, Andrew R COHEN, William J GODINEZ, Karl ROHR, Yannis KALAIDZIDIS, Liang LIANG, James DUNCAN, Hongying SHEN, Yingke XU, Klas E G MAGNUSSON, Joakim JALDÉN, Helen M BLAU, Perrine PAUL-GILLOTEAUX, Philippe ROUDOT, Charles KERVRANN, Fran$\backslash$c cois WAHARTE, Jean-Yves TINEVEZ, Spencer L SHORTE, Joost WILLEMSE, Katherine CELLER, Gilles P VAN WEZEL, Han-Wei DAN, Yuh-Show TSAI, Carlos ORTIZ-DE-SOLÓRZANO, Jean-Christophe OLIVO-MARIN and Erik MEIJERING. Objective Comparison of Particle Tracking Methods. \textit{Nature Methods}. 2014, vol.~11, No~3, p.~281-289. ISSN~1548-7091. Available from: https://dx.doi.org/10.1038/nmeth.2808.
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