BRÁZDOVÁ, Marie, Lucie NAVRATILOVA, Vlastimil TICHÝ, Kateřina NĚMCOVÁ, Matej LEXA, Roman HRSTKA, Petr PECINKA, Matej ADÁMIK, Bořivoj VOJTĚŠEK, Emil PALECEK, Wolfgang DEPPERT and Miroslav FOJTA. Preferential Binding of Hot Spot Mutant p53 Proteins to Supercoiled DNA In Vitro and in Cells. Plos One. SAN FRANCISCO: PUBLIC LIBRARY SCIENCE, 2013, vol. 8, No 3, p. "e59567", 17 pp. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0059567.
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Basic information
Original name Preferential Binding of Hot Spot Mutant p53 Proteins to Supercoiled DNA In Vitro and in Cells
Authors BRÁZDOVÁ, Marie (203 Czech Republic), Lucie NAVRATILOVA (203 Czech Republic), Vlastimil TICHÝ (203 Czech Republic, guarantor, belonging to the institution), Kateřina NĚMCOVÁ (203 Czech Republic), Matej LEXA (703 Slovakia, belonging to the institution), Roman HRSTKA (203 Czech Republic), Petr PECINKA (203 Czech Republic), Matej ADÁMIK (703 Slovakia, belonging to the institution), Bořivoj VOJTĚŠEK (203 Czech Republic), Emil PALECEK (203 Czech Republic), Wolfgang DEPPERT (276 Germany) and Miroslav FOJTA (203 Czech Republic, belonging to the institution).
Edition Plos One, SAN FRANCISCO, PUBLIC LIBRARY SCIENCE, 2013, 1932-6203.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 10608 Biochemistry and molecular biology
Country of publisher United States of America
Confidentiality degree is not subject to a state or trade secret
WWW Brazdova et al. 2013
Impact factor Impact factor: 3.534
RIV identification code RIV/00216224:14330/13:00066842
Organization unit Faculty of Informatics
Doi http://dx.doi.org/10.1371/journal.pone.0059567
UT WoS 000317418500055
Keywords in English p53 tumor supressor; mutp53 oncogenic mutations; DNA topology; superhelicity; DNA binding; BAX MSP/MST1 promoter
Changed by Changed by: doc. Ing. Matej Lexa, Ph.D., učo 31298. Changed: 13/3/2018 14:20.
Abstract
Hot spot mutant p53 (mutp53) proteins exert oncogenic gain-of-function activities. Binding of mutp53 to DNA is assumed to be involved in mutp53-mediated repression or activation of several mutp53 target genes. To investigate the importance of DNA topology on mutp53-DNA recognition in vitro and in cells, we analyzed the interaction of seven hot spot mutp53 proteins with topologically different DNA substrates (supercoiled, linear and relaxed) containing and/or lacking mutp53 binding sites (mutp53BS) using a variety of electrophoresis and immunoprecipitation based techniques. All seven hot spot mutp53 proteins (R175H, G245S, R248W, R249S, R273C, R273H and R282W) were found to have retained the ability of wild-type p53 to preferentially bind circular DNA at native negative superhelix density, while linear or relaxed circular DNA was a poor substrate. The preference of mutp53 proteins for supercoiled DNA (supercoil-selective binding) was further substantiated by competition experiments with linear DNA or relaxed DNA in vitro and ex vivo. Using chromatin immunoprecipitation, the preferential binding of mutp53 to a sc mutp53BS was detected also in cells. Furthermore, we have shown by luciferase reporter assay that the DNA topology influences p53 regulation of BAX and MSP/MST1 promoters. Possible modes of mutp53 binding to topologically constrained DNA substrates and their biological consequences are discussed.
Links
GA204/08/1560, research and development projectName: Bioinformatická a experimentální identifikace nekanonických struktur v genomové DNA
Investor: Czech Science Foundation, In vitro and in silico identification of non-canonical DNA structures in genomic sequences
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