How to understand quantum chemical computations on DNA and RNA systems? A practical guide for non-specialists
Autoři
ŠPONER, Jiří (203 Česká republika, garant, domácí), Judit ŠPONEROVÁ (348 Maďarsko, domácí), Arnošt MLÁDEK (203 Česká republika, domácí), Pavel BANÁŠ (203 Česká republika), Petr JURECKA (203 Česká republika) a Michal OTYEPKA (203 Česká republika)
Vydání
Methods, SAN DIEGO, ACADEMIC PRESS INC ELSEVIER SCIENCE, 2013, 1046-2023
In this review primarily written for non-experts we explain basic methodological aspects and interpretation of modern quantum chemical (QM) computations applied to nucleic acids. We introduce current reference QM computations on small model systems consisting of dozens of atoms. Then we comment on recent advance of fast and accurate dispersion-corrected density functional theory methods, which will allow computations of small but complete nucleic acids building blocks in the near future. The qualitative difference between QM and molecular mechanics (MM, force field) computations is discussed. We also explain relation of QM and molecular simulation computations to experiments. (C) 2013 Elsevier Inc. All rights reserved.
Návaznosti
ED1.1.00/02.0068, projekt VaV
Název: CEITEC - central european institute of technology