J
2013
High-Resolution Insight into G-Overhang Architecture
HAENSEL, Robert, Frank LOEHR, Lukáš TRANTÍREK a Volker DOETSCH
Základní údaje
Originální název
High-Resolution Insight into G-Overhang Architecture
Autoři
HAENSEL, Robert (276 Německo), Frank LOEHR (276 Německo),
Lukáš TRANTÍREK (203 Česká republika, garant, domácí) a Volker DOETSCH (276 Německo)
Vydání
Journal of the American Chemical Society, Washington, American Chemical Society, 2013, 0002-7863
Další údaje
Typ výsledku
Článek v odborném periodiku
Obor
10600 1.6 Biological sciences
Stát vydavatele
Spojené státy
Utajení
není předmětem státního či obchodního tajemství
Impakt faktor
Impact factor: 11.444
Kód RIV
RIV/00216224:14740/13:00072647
Organizační jednotka
Středoevropský technologický institut
Klíčová slova anglicky
HUMAN TELOMERIC DNA; INTRAMOLECULAR G-QUADRUPLEX; K+ SOLUTION; NMR-SPECTROSCOPY; SMALL-MOLECULE; HUMAN CANCER; PULSED EPR; STABILITY; SEQUENCE; CONFORMATIONS
Příznaky
Mezinárodní význam, Recenzováno
V originále
NMR and fluorescence spectroscopy were used to address the effect of intracellular molecular crowding and related hydration on a model telomeric G-quadruplex (G4) DNA structure (d(AG(3)(TTAGGG)(3))). d(AG(3)(TTAGGG)(3)) prevalently adopted the hybrid-1 conformation in vivo, ex vivo, and in dilute potassium-based solution, while it formed the parallel propeller fold in water-depleted potassium-based solution, a commonly used model system for studying intracellular molecular crowding. The dilute potassium-based solution appeared to imitate the properties of the cellular environment required for d(AG(3)(TTAGGG)(3)) folding under in vivo and ex vivo conditions. High-resolution NMR investigations of site-specifically N-15-labeled G4 units in native-like single-stranded telomeric DNA revealed that the 3'-terminal and internal G4 unit predominantly coexist in 2-tetrad antiparallel basket and hybrid-2 structures that are arranged in "beads-on-a-string"-like fashion. Our data provide the first high-resolution insight into the telomeric G-overhang architecture under essentially physiological conditions and identify the 2-tetrad antiparallel basket and hybrid-2 topologies as the structural targets for the development of telomere-specific G4 ligands.
Návaznosti
ED1.1.00/02.0068, projekt VaV | Název: CEITEC - central european institute of technology |
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Zobrazeno: 10. 11. 2024 23:05