SVOBODA, David, Vladimír ULMAN, Luděk MATYSKA, Martin MAŠKA, Ján BELLA and Stanislav STEJSKAL. On Proper Simulation of Phenomena Influencing Image Formation in Fluorescence Microscopy. In 2014 IEEE International Conference on Image Processing. Neuveden: IEEE Signal Processing Society. p. 3944-3948. ISBN 978-1-4799-5750-7. doi:10.1109/ICIP.2014.7025801. 2014.
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Basic information
Original name On Proper Simulation of Phenomena Influencing Image Formation in Fluorescence Microscopy
Authors SVOBODA, David (203 Czech Republic, guarantor, belonging to the institution), Vladimír ULMAN (203 Czech Republic, belonging to the institution), Luděk MATYSKA (203 Czech Republic, belonging to the institution), Martin MAŠKA (203 Czech Republic, belonging to the institution), Ján BELLA (703 Slovakia, belonging to the institution) and Stanislav STEJSKAL (203 Czech Republic, belonging to the institution).
Edition Neuveden, 2014 IEEE International Conference on Image Processing, p. 3944-3948, 5 pp. 2014.
Publisher IEEE Signal Processing Society
Other information
Original language English
Type of outcome Proceedings paper
Field of Study 20200 2.2 Electrical engineering, Electronic engineering, Information engineering
Country of publisher United States of America
Confidentiality degree is not subject to a state or trade secret
Publication form storage medium (CD, DVD, flash disk)
WWW URL
RIV identification code RIV/00216224:14330/14:00073637
Organization unit Faculty of Informatics
ISBN 978-1-4799-5750-7
Doi http://dx.doi.org/10.1109/ICIP.2014.7025801
UT WoS 000370063604023
Keywords in English Simulation; Biomedical imaging; Fluorescence microscopy; Photobleaching; Uneven illumination
Tags CBIA, cbia-web, firank_A
Tags International impact, Reviewed
Changed by Changed by: doc. RNDr. David Svoboda, Ph.D., učo 2824. Changed: 3/5/2016 10:48.
Abstract
The simulation plays an important role in biomedical image analysis as it can inherently provide large collections of image data with absolute ground truth. Compared to real image data typically annotated by some expert, the computer generated data still lacks the authenticity due to the simplifications of various natural phenomena. In this paper, we focus on simulating the photobleaching effect and the uneven illumination, being simplified or even omitted from the majority of present simulation toolkits, to considerably improve the authenticity of computer generated data.
Links
CZ.1.07/2.3.00/30.0030, interní kód MUName: Rozvoj lidských zdrojů pro oblast buněčné biologie
Investor: Ministry of Education, Youth and Sports of the CR, 2.3 Human resources in research and development
EE2.3.30.0009, research and development projectName: Zaměstnáním čerstvých absolventů doktorského studia k vědecké excelenci
GA14-22461S, research and development projectName: Vývoj a studium metod pro kvantifikaci živých buněk (Acronym: Live Cell Quantification)
Investor: Czech Science Foundation
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