J 2014

Dynamics and Hydration Explain Failed Functional Transformation in Dehalogenase Design.

SYKORA, J., Jan BREZOVSKÝ, Táňa KOUDELÁKOVÁ, M. LAHODA, Andrea FOŘTOVÁ et. al.

Basic information

Original name

Dynamics and Hydration Explain Failed Functional Transformation in Dehalogenase Design.

Authors

SYKORA, J. (203 Czech Republic), Jan BREZOVSKÝ (203 Czech Republic, belonging to the institution), Táňa KOUDELÁKOVÁ (203 Czech Republic, belonging to the institution), M. LAHODA (112 Belarus), Andrea FOŘTOVÁ (203 Czech Republic, belonging to the institution), T. CHERNOVETS (112 Belarus), Radka CHALOUPKOVÁ (203 Czech Republic, belonging to the institution), Veronika ŠTĚPÁNKOVÁ (203 Czech Republic, belonging to the institution), Zbyněk PROKOP (203 Czech Republic, belonging to the institution), I. KUTA SMATANOVA (203 Czech Republic), M. HOF (276 Germany) and Jiří DAMBORSKÝ (203 Czech Republic, guarantor, belonging to the institution)

Edition

Nature Chemical Biology, 2014, 1552-4450

Other information

Language

English

Type of outcome

Článek v odborném periodiku

Field of Study

10600 1.6 Biological sciences

Country of publisher

United States of America

Confidentiality degree

není předmětem státního či obchodního tajemství

Impact factor

Impact factor: 12.996

RIV identification code

RIV/00216224:14310/14:00074209

Organization unit

Faculty of Science

UT WoS

000336238200008

Keywords in English

haloalkane dehalogenase

Tags

AKR, rivok
Změněno: 21/3/2017 08:04, prof. Mgr. Jiří Damborský, Dr.

Abstract

V originále

We emphasize the importance of dynamics and hydration for enzymatic catalysis and protein design by transplanting the active site from a haloalkane dehalogenase with high enantioselectivity to nonselective dehalogenase. Protein crystallography confirms that the active site geometry of the redesigned dehalogenase matches that of the target, but its enantioselectivity remains low. Time-dependent fluorescence shifts and computer simulations revealed that dynamics and hydration at the tunnel mouth differ substantially between the redesigned and target dehalogenase.

Links

EE2.3.30.0037, research and development project
Name: Zaměstnáním nejlepších mladých vědců k rozvoji mezinárodní spolupráce
GAP503/12/0572, research and development project
Name: Konstrukce syntetické metabolické dráhy pro degradaci důležitého environmentálního polutantu proteinovým a metabolickým inženýrstvím
Investor: Czech Science Foundation
LO1214, research and development project
Name: Centrum pro výzkum toxických látek v prostředí (Acronym: RECETOX)
Investor: Ministry of Education, Youth and Sports of the CR
Displayed: 28/10/2024 17:15