SMET, Annemieke, Piet COOLS, Lenka KŘÍŽOVÁ, Martina MAIXNEROVÁ, Ondrej ŠEDO, Freddy HAESEBROUCK, Marie KEMPF, Alexandr NEMEC and Mario VANEECHOUTTE. Acinetobacter gandensis sp nov isolated from horse and cattle. International Journal of Systematic and Evolutionary Microbiology. Berks (England): Soc General Microbiology, 2014, vol. 64, December, p. 4007-4015. ISSN 1466-5026. Available from: https://dx.doi.org/10.1099/ijs.0.068791-0.
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Basic information
Original name Acinetobacter gandensis sp nov isolated from horse and cattle
Authors SMET, Annemieke (56 Belgium), Piet COOLS (56 Belgium), Lenka KŘÍŽOVÁ (203 Czech Republic), Martina MAIXNEROVÁ (203 Czech Republic), Ondrej ŠEDO (203 Czech Republic, guarantor, belonging to the institution), Freddy HAESEBROUCK (56 Belgium), Marie KEMPF (250 France), Alexandr NEMEC (203 Czech Republic) and Mario VANEECHOUTTE (56 Belgium).
Edition International Journal of Systematic and Evolutionary Microbiology, Berks (England), Soc General Microbiology, 2014, 1466-5026.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 10600 1.6 Biological sciences
Country of publisher United Kingdom of Great Britain and Northern Ireland
Confidentiality degree is not subject to a state or trade secret
WWW URL
Impact factor Impact factor: 2.511
RIV identification code RIV/00216224:14740/14:00074419
Organization unit Central European Institute of Technology
Doi http://dx.doi.org/10.1099/ijs.0.068791-0
UT WoS 000348622000014
Keywords in English Acinetobacter gandensis; taxonomy; rpoB; 16S rRNA gene; MALDI-TOF MS
Tags kontrola MP, rivok
Tags International impact, Reviewed
Changed by Changed by: Martina Prášilová, učo 342282. Changed: 11/3/2015 12:36.
Abstract
We previously reported the presence of an OXA-23 carbapenemase in an undescribed species of the genus Acinetobacter isolated from horse dung at the Faculty of Veterinary Medicine, Ghent University, Belgium. Here we include six strains to corroborate the delineation of this taxon by phenotypic characterization, DNA-DNA hybridization, 16S rRNA gene and rpoB sequence analysis, % G+C determination, MALDI-TOF MS and fatty acid analysis. The nearly complete 16S rRNA gene sequence of strain UG 60467(T) showed the highest similarities with those of the type strains of Acinetobacter bouvetii (98.4%), Acinetobacter haemolyticus (97.7%), and Acinetobacter schindleri (97.2%). The partial rpoB sequence of strain UG 60467(T) showed the highest similarities with 'Acinetobacter bohemicus' ANC 3994 (88.6%), A. bouvetii NIPH 2281 (88.6%) and A. schindleri CIP 1072871 (87.3%). Whole-cell MALDI-TOF MS analyses supported the distinctness of the group at the protein level. The predominant fatty acids of strain UG 60467(T) were C-12:0 3-OH, C-12:0, C-16:0, C-18:1 omega 9c and summed feature 3 (C-16:1 omega 7c and/or iso-C-15:0 2-OH). Strains UG 60467(T) and UG 60716 showed a DNA-DNA relatedness of 84% with each other and a DNA-DNA relatedness with A. schindleri LMG 19576(T) of 17 % and 20%, respectively. The DNA G C content of strain UG 60467(T) was 39.6 molok. The name Acinetobacter gandensis sp. nov. is proposed for the novel taxon. The type strain is UG 60467(T) (=ANC 4275(T)=LMG 27960(T)=DSM 28097(T)).
Links
GA13-26693S, research and development projectName: Genetická diverzita a fylogeneze rodu Acinetobacter v přírodních ekosystémech.
Investor: Czech Science Foundation
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