TRIPSIANES, Konstantinos, A. FRIBERG, Ch. BARRANDON, M. BROOKS, H. VAN TILBEURGH, B. SERAPHIN and Michael SATTLER. A Novel Protein-Protein Interaction in the RES (REtention and Splicing) Complex. Journal of Biological Chemistry. Bethesda, USA: Amer. Soc. Biochem. Mol. Biol., 2014, vol. 289, No 41, p. 28640-28650. ISSN 0021-9258. doi:10.1074/jbc.M114.592311.
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Basic information
Original name A Novel Protein-Protein Interaction in the RES (REtention and Splicing) Complex
Authors TRIPSIANES, Konstantinos (300 Greece, guarantor, belonging to the institution), A. FRIBERG (276 Germany), Ch. BARRANDON (250 France), M. BROOKS (250 France), H. VAN TILBEURGH (250 France), B. SERAPHIN (250 France) and Michael SATTLER (276 Germany).
Edition Journal of Biological Chemistry, Bethesda, USA, Amer. Soc. Biochem. Mol. Biol. 2014, 0021-9258.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 10600 1.6 Biological sciences
Country of publisher United States of America
Confidentiality degree is not subject to a state or trade secret
WWW URL
Impact factor Impact factor: 4.573
RIV identification code RIV/00216224:14740/14:00079761
Organization unit Central European Institute of Technology
Doi http://dx.doi.org/10.1074/jbc.M114.592311
UT WoS 000343765400052
Keywords in English MESSENGER-RNA RETENTION; RECOGNITION MOTIF; NMR; YEAST; CRYSTALLOGRAPHY; SPLICEOSOME; SYSTEM; DOMAIN; CORE
Tags kontrola MP, MP, OA, rivok
Tags International impact, Reviewed
Changed by Changed by: Martina Prášilová, učo 342282. Changed: 25. 3. 2015 10:06.
Abstract
The retention and splicing (RES) complex is a conserved spliceosome-associated module that was shown to enhance splicing of a subset of transcripts and promote the nuclear retention of unspliced pre-mRNAs in yeast. The heterotrimeric RES complex is organized around the Snu17p protein that binds to both the Bud13p and Pml1p subunits. Snu17p exhibits an RRM domain that resembles a U2AF homology motif (UHM) and Bud13p harbors a Trp residue reminiscent of an UHM-ligand motif (ULM). It has therefore been proposed that the interaction between Snu17p and Bud13p resembles canonical UHM-ULM complexes. Here, we have used biochemical and NMR structural analysis to characterize the structure of the yeast Snu17p-Bud13p complex. Unlike known UHMs that sequester the Trp residue of the ULM ligand in a hydrophobic pocket, Snu17p and Bud13p utilize a large interaction surface formed around the two helices of the Snu17p domain. In total 18 residues of the Bud13p ligand wrap around the Snu17p helical surface in an U-turn-like arrangement. The invariant Trp232 in Bud13p is located in the center of the turn, and contacts surface residues of Snu17p. The structural data are supported by mutational analysis and indicate that Snu17p provides an extended binding surface with Bud13p that is notably distinct from canonical UHM-ULM interactions. Our data highlight structural diversity in RRM-protein interactions, analogous to the one seen for nucleic acid interactions.
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EE2.3.20.0042, research and development projectName: Internacionalizace programu Strukturní biologie s důrazem na rozvoj nových směrů výzkumu
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