POSPÍCHALOVÁ, Vendula, Jan SVOBODA, Zankruti DAVE, Anna KOTRBOVÁ, Karol KAISER, Dobromila KLEMOVÁ, Ladislav ILKOVICS, Aleš HAMPL, Igor CRHA, Eva JANDÁKOVÁ, Luboš MINÁŘ, Vít WEINBERGER and Vítězslav BRYJA. Simplified protocol for flow cytometry analysis of fluorescently labeled exosomes and microvesicles using dedicated flow cytometer. Journal of Extracellular Vesicles. Järfälla: Co-Action Publishing, 2015, vol. 4, No 25530, p. 1-15. ISSN 2001-3078. Available from: https://dx.doi.org/10.3402/jev.v4.25530.
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Basic information
Original name Simplified protocol for flow cytometry analysis of fluorescently labeled exosomes and microvesicles using dedicated flow cytometer
Authors POSPÍCHALOVÁ, Vendula (203 Czech Republic, belonging to the institution), Jan SVOBODA (203 Czech Republic), Zankruti DAVE (356 India, belonging to the institution), Anna KOTRBOVÁ (203 Czech Republic, belonging to the institution), Karol KAISER (703 Slovakia, belonging to the institution), Dobromila KLEMOVÁ (203 Czech Republic, belonging to the institution), Ladislav ILKOVICS (203 Czech Republic, belonging to the institution), Aleš HAMPL (203 Czech Republic, belonging to the institution), Igor CRHA (203 Czech Republic), Eva JANDÁKOVÁ (203 Czech Republic, belonging to the institution), Luboš MINÁŘ (203 Czech Republic), Vít WEINBERGER (203 Czech Republic) and Vítězslav BRYJA (203 Czech Republic, belonging to the institution).
Edition Journal of Extracellular Vesicles, Järfälla, Co-Action Publishing, 2015, 2001-3078.
Other information
Original language English
Type of outcome Article in a journal
Field of Study Genetics and molecular biology
Country of publisher Sweden
Confidentiality degree is not subject to a state or trade secret
WWW URL
RIV identification code RIV/00216224:14310/15:00080746
Organization unit Faculty of Science
Doi http://dx.doi.org/10.3402/jev.v4.25530
UT WoS 000365076000001
Keywords in English CFSE; ascites; exosomes; extracellular vesicles; flow cytometry; fluorescent labeling; lipophilic styryl dye; microvesicles; quantification
Tags AKR, EL OK, podil, rivok
Tags International impact, Reviewed
Changed by Changed by: Ing. Andrea Mikešková, učo 137293. Changed: 8/4/2016 14:29.
Abstract
Flow cytometry is a powerful method, which is widely used for high-throughput quantitative and qualitative analysis of cells. However, its straightforward applicability for extracellular vesicles (EVs) and mainly exosomes is hampered by several challenges, reflecting mostly the small size of these vesicles (exosomes: similar to 80-200 nm, microvesicles: similar to 200-1,000 nm), their polydispersity, and low refractive index. The current best and most widely used protocol for beads-free flow cytometry of exosomes uses ultracentrifugation (UC) coupled with floatation in sucrose gradient for their isolation, labeling with lipophilic dye PKH67 and antibodies, and an optimized version of commercial high-end cytometer for analysis. However, this approach requires an experienced flow cytometer operator capable of manual hardware adjustments and calibration of the cytometer. Here, we provide a novel and fast approach for quantification and characterization of both exosomes and microvesicles isolated from cell culture media as well as from more complex human samples (ascites of ovarian cancer patients) suitable for multiuser labs by using a flow cytometer especially designed for small particles, which can be used without adjustments prior to data acquisition. EVs can be fluorescently labeled with protein-(Carboxyfluoresceinsuccinimidyl ester, CFSE) and/or lipid- (FM) specific dyes, without the necessity of removing the unbound fluorescent dye by UC, which further facilitates and speeds up the characterization of microvesicles and exosomes using flow cytometry. In addition, double labeling with protein-and lipid-specific dyes enables separation of EVs from common contaminants of EV preparations, such as protein aggregates or micelles formed by unbound lipophilic styryl dyes, thus not leading to overestimation of EV numbers. Moreover, our protocol is compatible with antibody labeling using fluorescently conjugated primary antibodies. The presented methodology opens the possibility for routine quantification and characterization of EVs from various sources. Finally, it has the potential to bring a desired level of control into routine experiments and non-specialized labs, thanks to its simple bead-based standardization.
Links
EE2.3.30.0009, research and development projectName: Zaměstnáním čerstvých absolventů doktorského studia k vědecké excelenci
GAP301/11/0747, research and development projectName: Molekulární mechanismy nekanonické Wnt signalizace v leukémii
Investor: Czech Science Foundation
MUNI/M/1050/2013, interní kód MUName: Automatizovaná analýza elektronmikroskopických snímků pro použití v biologii a medicíně (Acronym: Analýza TEM snímků)
Investor: Masaryk University, INTERDISCIPLINARY - Interdisciplinary research projects
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