PERNIKÁŘOVÁ, Vendula, Vojtěch SEDLÁČEK, David POTĚŠIL, Iva PROCHÁZKOVÁ, Zbyněk ZDRÁHAL, Pavel BOUCHAL and Igor KUČERA. Proteome-wide dataset generated by iTRAQ-3DLCMS/MS technique for studying the role of FerB protein in oxidative stress in Paracoccus denitrificans. Data in Brief. Amsterdam: Elsevier, 2015, vol. 4, September, p. 390-394. ISSN 2352-3409. Available from: https://dx.doi.org/10.1016/j.dib.2015.06.015. |
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@article{1308777, author = {Pernikářová, Vendula and Sedláček, Vojtěch and Potěšil, David and Procházková, Iva and Zdráhal, Zbyněk and Bouchal, Pavel and Kučera, Igor}, article_location = {Amsterdam}, article_number = {September}, doi = {http://dx.doi.org/10.1016/j.dib.2015.06.015}, keywords = {Paracoccus denitrificans; 3DLC proteomics; FerB; iTRAQ; Microbial proteomics}, language = {eng}, issn = {2352-3409}, journal = {Data in Brief}, title = {Proteome-wide dataset generated by iTRAQ-3DLCMS/MS technique for studying the role of FerB protein in oxidative stress in Paracoccus denitrificans}, volume = {4}, year = {2015} }
TY - JOUR ID - 1308777 AU - Pernikářová, Vendula - Sedláček, Vojtěch - Potěšil, David - Procházková, Iva - Zdráhal, Zbyněk - Bouchal, Pavel - Kučera, Igor PY - 2015 TI - Proteome-wide dataset generated by iTRAQ-3DLCMS/MS technique for studying the role of FerB protein in oxidative stress in Paracoccus denitrificans JF - Data in Brief VL - 4 IS - September SP - 390-394 EP - 390-394 PB - Elsevier SN - 23523409 KW - Paracoccus denitrificans KW - 3DLC proteomics KW - FerB KW - iTRAQ KW - Microbial proteomics N2 - 3DLC protein- and peptide fractionation technique combined with iTRAQ-peptide labeling and Orbitrap mass spectrometry was employed to quantitate Paracoccus dentirificans total proteome with maximal coverage. This resulted in identification of 24948 peptides representing 2627 proteins (FDR<0.01) in P. dentirificans wild type and ferB mutant strains grown in the presence or absence of methyl viologen as an oxidative stressor. The data were generated for assessment of FerB protein role in oxidative stress as published by V. Pernikářová et al., Proteomic responses to a methyl viologeninduced oxidative stress in the wild type and FerB mutant strains of Paracoccus denitrificans, J Proteomics 2015;125:68-75. Dataset is supplied in the article. ER -
PERNIKÁŘOVÁ, Vendula, Vojtěch SEDLÁČEK, David POTĚŠIL, Iva PROCHÁZKOVÁ, Zbyněk ZDRÁHAL, Pavel BOUCHAL and Igor KUČERA. Proteome-wide dataset generated by iTRAQ-3DLCMS/MS technique for studying the role of FerB protein in oxidative stress in Paracoccus denitrificans. \textit{Data in Brief}. Amsterdam: Elsevier, 2015, vol.~4, September, p.~390-394. ISSN~2352-3409. Available from: https://dx.doi.org/10.1016/j.dib.2015.06.015.
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