| DVOŘÁKOVÁ, Hana, Lucie JEDLIČKOVÁ, Martin KAŠNÝ, Jana ILGOVÁ, Pavel BROŽ, Hynek STRNAD, Roman LEONTOVIČ, Pavel ROUDNICKÝ, Jiří VOREL, Ewa DZIKA, Libor MIKEŠ and Milan GELNAR. Eudiplozoon nipponicum (Monogenea): Challenge for next-generation sequencing. In 9th International Symposium of Fish Parasites. 2015. |
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@proceedings{1313983,
author = {Dvořáková, Hana and Jedličková, Lucie and Kašný, Martin and Ilgová, Jana and Brož, Pavel and Strnad, Hynek and Leontovič, Roman and Roudnický, Pavel and Vorel, Jiří and Dzika, Ewa and Mikeš, Libor and Gelnar, Milan},
booktitle = {9th International Symposium of Fish Parasites},
keywords = {Eudiplozoon nipponicum; Monogenea; next gene sequencing; transcriptome; genome},
language = {eng},
title = {Eudiplozoon nipponicum (Monogenea): Challenge for next-generation sequencing},
year = {2015}
}
TY - CONF
ID - 1313983
AU - Dvořáková, Hana - Jedličková, Lucie - Kašný, Martin - Ilgová, Jana - Brož, Pavel - Strnad, Hynek - Leontovič, Roman - Roudnický, Pavel - Vorel, Jiří - Dzika, Ewa - Mikeš, Libor - Gelnar, Milan
PY - 2015
TI - Eudiplozoon nipponicum (Monogenea): Challenge for next-generation sequencing
KW - Eudiplozoon nipponicum
KW - Monogenea
KW - next gene sequencing
KW - transcriptome
KW - genome
N2 - Eudiplozoon nipponicum (family Diplozoidae, Polyopisthocotylea) is the hematophagous ectoparasite from the gills of cyprinid fish (Cyprinus carpio). The properties of genes (e.g. identity, structure, evolution) and proteins (e.g. function) of the members from the family Monogenea are among the less investigated in whole phylum Platyhelminthes. Up to now only two genomes and one transcriptome of monogenean species have been sequenced – genome of Protopolystoma xenopodis (Polyopisthocotylea) and Gyrodactylus salaris (Monopisthocotylea) and transcriptome of Neobenedenia melleni. Therefore we adopted the Illumina MiSeq/HiSeq techniques for sequencing the genomic DNA and RNA isolated from adult worms of E. nipponicum. This was followed by comprehensive bioinformatic analysis of sequential data.
ER -
DVOŘÁKOVÁ, Hana, Lucie JEDLIČKOVÁ, Martin KAŠNÝ, Jana ILGOVÁ, Pavel BROŽ, Hynek STRNAD, Roman LEONTOVIČ, Pavel ROUDNICKÝ, Jiří VOREL, Ewa DZIKA, Libor MIKEŠ and Milan GELNAR. Eudiplozoon nipponicum (Monogenea): Challenge for next-generation sequencing. In \textit{9th International Symposium of Fish Parasites}. 2015.
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