Description of Pseudomonas gregormendelii sp. nov., a novel
psychrotrophic bacterium from James Ross Island, Antarctica

J 2016

Description of Pseudomonas gregormendelii sp. nov., a novel psychrotrophic bacterium from James Ross Island, Antarctica

KOSINA, Marcel, Pavel ŠVEC, Jitka ČERNOHLÁVKOVÁ, Miloš BARTÁK, Kateřina SNOPKOVÁ et. al.

Basic information

Original name

Description of Pseudomonas gregormendelii sp. nov., a novel psychrotrophic bacterium from James Ross Island, Antarctica

Authors

KOSINA, Marcel (203 Czech Republic, guarantor, belonging to the institution), Pavel ŠVEC (203 Czech Republic, belonging to the institution), Jitka ČERNOHLÁVKOVÁ (203 Czech Republic, belonging to the institution), Miloš BARTÁK (203 Czech Republic, belonging to the institution), Kateřina SNOPKOVÁ (203 Czech Republic, belonging to the institution), Paul DE VOS (56 Belgium) and Ivo SEDLÁČEK (203 Czech Republic, belonging to the institution)

Edition

Current Microbiology, 2016, 0343-8651

Other information

Language

English

Type of outcome

Článek v odborném periodiku

Field of Study

10600 1.6 Biological sciences

Country of publisher

United States of America

Confidentiality degree

není předmětem státního či obchodního tajemství

Impact factor

Impact factor: 1.322

RIV identification code

RIV/00216224:14310/16:00090578

Organization unit

Faculty of Science

DOI

http://dx.doi.org/10.1007/s00284-016-1029-5

UT WoS

000377410300012

Keywords in English

Pseudomonas gregormendelii; taxonomy; description; Antarctica

Abstract

V originále

During the microbiological research performed within the scope of activities of Czech expeditions based at the Johann Gregor Mendel Station at James Ross Island, Antarctica, two psychrotrophic gram-stain negative non-fluorescent strains CCM 8506T and CCM 8507 from soil were extensively characterized using genotypic and phenotypic methods. Initial characterization using ribotyping with HindIII restriction endonuclease and phenotyping implies that both isolates belong to a single Pseudomonas species. Sequencing of rrs, rpoB, rpoD and glnA genes of strain CCM 8506(T) confirmed affiliation of investigated strains within the genus Pseudomonas. Further investigation using automated ribotyping with EcoRI (RiboPrinter(A (R)) Microbial Characterisation System), whole-cell protein profiling using the Agilent 2100 Bioanalyzer system, extensive biochemical testing and DNA-DNA hybridization experiments confirmed that both investigated strains are members of a single taxon which is clearly separated from all hitherto described Pseudomonas spp. Based on all findings, we describe a novel species Pseudomonas gregormendelii sp. nov. with the type strain CCM 8506(T) (=LMG 28632T).

Links

EE2.3.20.0183, research and development project

Name: Centrum experimentální biomedicíny

LM2010009, research and development project

Name: Projekt CzechPolar - České polární stanice: Stavba a operační náklady

Investor: Ministry of Education, Youth and Sports of the CR

Citovat

KOSINA, Marcel, Pavel ŠVEC, Jitka ČERNOHLÁVKOVÁ, Miloš BARTÁK, Kateřina SNOPKOVÁ, Paul DE VOS and Ivo SEDLÁČEK. Description of Pseudomonas gregormendelii sp. nov., a novel psychrotrophic bacterium from James Ross Island, Antarctica. Current Microbiology. 2016, vol. 73, No 1, p. 84-90. ISSN 0343-8651. Available from: https://dx.doi.org/10.1007/s00284-016-1029-5.

@article{1351748,
   author = {Kosina, Marcel and Švec, Pavel and Černohlávková, Jitka and Barták, Miloš and Snopková, Kateřina and De Vos, Paul and Sedláček, Ivo},
   article_number = {1},
   doi = {http://dx.doi.org/10.1007/s00284-016-1029-5},
   keywords = {Pseudomonas gregormendelii; taxonomy; description; Antarctica},
   language = {eng},
   issn = {0343-8651},
   journal = {Current Microbiology},
   title = {Description of Pseudomonas gregormendelii sp. nov., a novel psychrotrophic bacterium from James Ross Island, Antarctica},
   volume = {73},
   year = {2016}
}

TY  - JOUR
ID  - 1351748
AU  - Kosina, Marcel - Švec, Pavel - Černohlávková, Jitka - Barták, Miloš - Snopková, Kateřina - De Vos, Paul - Sedláček, Ivo
PY  - 2016
TI  - Description of Pseudomonas gregormendelii sp. nov., a novel psychrotrophic bacterium from James Ross Island, Antarctica
JF  - Current Microbiology
VL  - 73
IS  - 1
SP  - 84-90
EP  - 84-90
SN  - 03438651
KW  - Pseudomonas gregormendelii
KW  - taxonomy
KW  - description
KW  - Antarctica
N2  - During the microbiological research performed within the scope of activities of Czech expeditions based at the Johann Gregor Mendel Station at James Ross Island, Antarctica, two psychrotrophic gram-stain negative non-fluorescent strains CCM 8506T and CCM 8507 from soil were extensively characterized using genotypic and phenotypic methods. Initial characterization using ribotyping with HindIII restriction endonuclease and phenotyping implies that both isolates belong to a single Pseudomonas species. Sequencing of rrs, rpoB, rpoD and glnA genes of strain CCM 8506(T) confirmed affiliation of investigated strains within the genus Pseudomonas. Further investigation using automated ribotyping with EcoRI (RiboPrinter(A (R)) Microbial Characterisation System), whole-cell protein profiling using the Agilent 2100 Bioanalyzer system, extensive biochemical testing and DNA-DNA hybridization experiments confirmed that both investigated strains are members of a single taxon which is clearly separated from all hitherto described Pseudomonas spp. Based on all findings, we describe a novel species Pseudomonas gregormendelii sp. nov. with the type strain CCM 8506(T) (=LMG 28632T).
ER  -

KOSINA, Marcel, Pavel ŠVEC, Jitka ČERNOHLÁVKOVÁ, Miloš BARTÁK, Kateřina SNOPKOVÁ, Paul DE VOS and Ivo SEDLÁČEK. Description of Pseudomonas gregormendelii sp. nov., a novel psychrotrophic bacterium from James Ross Island, Antarctica. \textit{Current Microbiology}. 2016, vol.~73, No~1, p.~84-90. ISSN~0343-8651. Available from: https://dx.doi.org/10.1007/s00284-016-1029-5.

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