J 2016

Description of Pseudomonas gregormendelii sp. nov., a novel psychrotrophic bacterium from James Ross Island, Antarctica

KOSINA, Marcel, Pavel ŠVEC, Jitka ČERNOHLÁVKOVÁ, Miloš BARTÁK, Kateřina SNOPKOVÁ et. al.

Basic information

Original name

Description of Pseudomonas gregormendelii sp. nov., a novel psychrotrophic bacterium from James Ross Island, Antarctica

Authors

KOSINA, Marcel (203 Czech Republic, guarantor, belonging to the institution), Pavel ŠVEC (203 Czech Republic, belonging to the institution), Jitka ČERNOHLÁVKOVÁ (203 Czech Republic, belonging to the institution), Miloš BARTÁK (203 Czech Republic, belonging to the institution), Kateřina SNOPKOVÁ (203 Czech Republic, belonging to the institution), Paul DE VOS (56 Belgium) and Ivo SEDLÁČEK (203 Czech Republic, belonging to the institution)

Edition

Current Microbiology, 2016, 0343-8651

Other information

Language

English

Type of outcome

Článek v odborném periodiku

Field of Study

10600 1.6 Biological sciences

Country of publisher

United States of America

Confidentiality degree

není předmětem státního či obchodního tajemství

Impact factor

Impact factor: 1.322

RIV identification code

RIV/00216224:14310/16:00090578

Organization unit

Faculty of Science

DOI

http://dx.doi.org/10.1007/s00284-016-1029-5

UT WoS

000377410300012

Keywords in English

Pseudomonas gregormendelii; taxonomy; description; Antarctica

Tags

AKR, EL OK, podil, rivok
Změněno: 13/3/2018 23:31, prof. RNDr. Ivo Sedláček, CSc.

Abstract

V originále

During the microbiological research performed within the scope of activities of Czech expeditions based at the Johann Gregor Mendel Station at James Ross Island, Antarctica, two psychrotrophic gram-stain negative non-fluorescent strains CCM 8506T and CCM 8507 from soil were extensively characterized using genotypic and phenotypic methods. Initial characterization using ribotyping with HindIII restriction endonuclease and phenotyping implies that both isolates belong to a single Pseudomonas species. Sequencing of rrs, rpoB, rpoD and glnA genes of strain CCM 8506(T) confirmed affiliation of investigated strains within the genus Pseudomonas. Further investigation using automated ribotyping with EcoRI (RiboPrinter(A (R)) Microbial Characterisation System), whole-cell protein profiling using the Agilent 2100 Bioanalyzer system, extensive biochemical testing and DNA-DNA hybridization experiments confirmed that both investigated strains are members of a single taxon which is clearly separated from all hitherto described Pseudomonas spp. Based on all findings, we describe a novel species Pseudomonas gregormendelii sp. nov. with the type strain CCM 8506(T) (=LMG 28632T).

Links

EE2.3.20.0183, research and development project
Name: Centrum experimentální biomedicíny
LM2010009, research and development project
Name: Projekt CzechPolar - České polární stanice: Stavba a operační náklady
Investor: Ministry of Education, Youth and Sports of the CR
Displayed: 16/11/2024 17:05