PELCOVÁ, Marta, Roman ŘEMÍNEK, Friederike A SANDBAUMHÜTER, Richard A MOSHER, Zdeněk GLATZ and Wolfgang THORMANN. Simulation and experimental study of enzyme and reactant mixing in capillary electrophoresis based on-line methods. Journal of Chromatography A. Holandsko: Elsevier, 2016, vol. 1471, November, p. 192-200. ISSN 0021-9673. Available from: https://dx.doi.org/10.1016/j.chroma.2016.10.002.
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Basic information
Original name Simulation and experimental study of enzyme and reactant mixing in capillary electrophoresis based on-line methods
Authors PELCOVÁ, Marta (203 Czech Republic, guarantor, belonging to the institution), Roman ŘEMÍNEK (203 Czech Republic, belonging to the institution), Friederike A SANDBAUMHÜTER (276 Germany), Richard A MOSHER (840 United States of America), Zdeněk GLATZ (203 Czech Republic, belonging to the institution) and Wolfgang THORMANN (756 Switzerland).
Edition Journal of Chromatography A, Holandsko, Elsevier, 2016, 0021-9673.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 10600 1.6 Biological sciences
Country of publisher Netherlands
Confidentiality degree is not subject to a state or trade secret
Impact factor Impact factor: 3.981
RIV identification code RIV/00216224:14310/16:00088196
Organization unit Faculty of Science
Doi http://dx.doi.org/10.1016/j.chroma.2016.10.002
UT WoS 000387520400022
Keywords (in Czech) kapilární elektroforéza; enzymov\á reakce; elektroforeticky zprostředkovaná analýza; difuze; simulace; Taylor-Aris disperze;
Keywords in English capillary electrophoresis; enzyme reaction; electrophoretically mediated microanalysis; diffusion; simulation; Taylor-Aris dispersion
Tags AKR, rivok
Changed by Changed by: Ing. Andrea Mikešková, učo 137293. Changed: 13/4/2017 22:23.
Abstract
The establishment of an efficient reaction mixture represents a crucial part of capillary electrophoresis based on-line enzymatic assays. For ketamine N-demethylation to norketamine mediated by the cytochrome P450 3A4 enzyme, mixing of enzyme and reactants in the incubation buffer at physiological pH was studied by computer simulation. A dynamic electrophoretic simulator that encompasses Taylor-Aris diffusivity which accounts for dispersion due to the parabolic flow profile associated with pressure driven flow was utilized. The simulator in the diffusion mode was used to predict transverse diffusional reactant mixing occurring during hydrodynamic plug injection of configurations featuring four and seven plugs. The same simulator in the electrophoretic mode was applied to study electrophoretic reactant mixing caused by voltage application in absence of buffer flow. Resulting conclusions were experimentally verified with enantioselective analysis of norketamine in a background electrolyte at low pH. Furthermore, simulations visualize buffer changes that occur upon power application between incubation buffer and background electrolyte and have an influence on the reaction mixture.
Abstract (in Czech)
Byly provedeny simulace difuzního a elektromigračního míchání enzymové reakce cytochromu P450 3A4 s ketamínem.
Links
GA16-06106S, research and development projectName: Vysoce efektivní systém založený na kapilární elektroforéze pro screening inhibitorů beta-sekretázy jako terapeutického cíle pro Alzheimerovu chorobu (Acronym: Alzheimer)
Investor: Czech Science Foundation
MUNI/A/1265/2015, interní kód MUName: Podpora biochemického výzkumu v roce 2016
Investor: Masaryk University, Category A
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