Detailed Information on Publication Record
2017
Pedobacter jamesrossensis sp. nov., Pedobacter lithocola sp. nov., Pedobacter mendelii sp. nov. and Pedobacter petrophilus sp. nov., isolated from the Antarctic environment
ŠVEC, Pavel, Stanislava KRÁLOVÁ, Hans-Jürgen BUSSE, Tanita KLEINHAGAUER, Roman PANTŮČEK et. al.Basic information
Original name
Pedobacter jamesrossensis sp. nov., Pedobacter lithocola sp. nov., Pedobacter mendelii sp. nov. and Pedobacter petrophilus sp. nov., isolated from the Antarctic environment
Authors
ŠVEC, Pavel (203 Czech Republic, guarantor, belonging to the institution), Stanislava KRÁLOVÁ (703 Slovakia, belonging to the institution), Hans-Jürgen BUSSE (40 Austria), Tanita KLEINHAGAUER (40 Austria), Roman PANTŮČEK (203 Czech Republic, belonging to the institution), Ivana MAŠLAŇOVÁ (203 Czech Republic, belonging to the institution), Margo CNOCKAERT (56 Belgium), Peter VANDAMME (56 Belgium), Eva STAŇKOVÁ (203 Czech Republic, belonging to the institution), Tereza GELBÍČOVÁ (203 Czech Republic, belonging to the institution), Pavla HOLOCHOVÁ (203 Czech Republic, belonging to the institution), Miloš BARTÁK (203 Czech Republic, belonging to the institution), Kamila KÝROVÁ (203 Czech Republic, belonging to the institution) and Ivo SEDLÁČEK (203 Czech Republic, belonging to the institution)
Edition
International Journal of Systematic and Evolutionary Microbiology, London, Society for General Microbiology, 2017, 1466-5026
Other information
Language
English
Type of outcome
Článek v odborném periodiku
Field of Study
10606 Microbiology
Country of publisher
United Kingdom of Great Britain and Northern Ireland
Confidentiality degree
není předmětem státního či obchodního tajemství
References:
Impact factor
Impact factor: 1.932
RIV identification code
RIV/00216224:14310/17:00096919
Organization unit
Faculty of Science
UT WoS
000403696100060
Keywords in English
Pedobacter jamesrossensis sp nov.; Pedobacter lithocola sp nov.; Pedobacter mendelii sp nov.; Pedobacter petrophilus sp nov.; James Ross Island; Antarctica
Tags
International impact, Reviewed
Změněno: 10/4/2018 14:41, Ing. Nicole Zrilić
Abstract
V originále
A taxonomic study performed on 17 Gram-stain-negative rod-shaped bacterial strains originating from the Antarctic environment is described. Initial phylogenetic analysis using 16S rRNA gene sequencing differentiated the strains into four groups belonging to the genus Pedobacter but they were separated from all hitherto described Pedobacter species. Group I (n=8) was closest to Pedobacter aquatilis (97.8% 16S rRNA gene sequence similarity). Group II (n=2) and group III (n=4) were closely related (98.8% 16S rRNA gene sequence similarity) and had Pedobacter jejuensis as their common nearest neighbour. Group IV (n=3) was distantly delineated from the remaining Pedobacter species. Differentiation of the analysed strains into four clusters was further confirmed by repetitive sequence-based PCR fingerprinting, ribotyping, DNA–DNA hybridization and phenotypic traits. Common to representative strains for the four groups were the presence of major menaquinone MK-7, sym-homospermidine as the major polyamine, phosphatidylethanolamine, two unidentified lipids (L2, L5) and an unidentified aminolipid (AL2) as the major polar lipids, presence of an alkali-stable lipid, and C16:1omega7c/C16:1omega6c (summed feature 3), iso-C15:0 and iso-C 17:0 3-OH as the major fatty acids, which corresponded to characteristics of the genus Pedobacter. The obtained results showed that the strains analysed represent four novel species of the genus Pedobacter, for which the names Pedobacter jamesrossensis sp. nov. (type strain CCM 8689T=LMG 29684T), Pedobacter lithocola sp. nov. (CCM 8691T=LMG 29685T), Pedobacter mendelii sp. nov. (CCM 8685T=LMG 29688T) and Pedobacter petrophilus sp. nov. (CCM 8687T=LMG 29686T) are proposed.
Links
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