VÝTVAROVÁ, Eva, Jan FOUSEK, Marek BARTOŇ, Radek MAREČEK, Martin GAJDOŠ, Martin LAMOŠ, Marie NOVÁKOVÁ, Tomáš SLAVÍČEK, Igor PETERLÍK and Michal MIKL. The Impact of Diverse Preprocessing Pipelines on Brain Functional Connectivity. Online. In 25th European Signal Processing Conference (EUSIPCO), Kos, Greece. Kos, Greece: IEEE, 2017, p. 2644-2648. ISBN 978-0-9928626-7-1. Available from: https://dx.doi.org/10.23919/EUSIPCO.2017.8081690.
Other formats:   BibTeX LaTeX RIS
Basic information
Original name The Impact of Diverse Preprocessing Pipelines on Brain Functional Connectivity
Authors VÝTVAROVÁ, Eva (203 Czech Republic, belonging to the institution), Jan FOUSEK (203 Czech Republic, belonging to the institution), Marek BARTOŇ (203 Czech Republic, belonging to the institution), Radek MAREČEK (203 Czech Republic, belonging to the institution), Martin GAJDOŠ (203 Czech Republic, belonging to the institution), Martin LAMOŠ (203 Czech Republic, belonging to the institution), Marie NOVÁKOVÁ (203 Czech Republic, belonging to the institution), Tomáš SLAVÍČEK (203 Czech Republic, belonging to the institution), Igor PETERLÍK (703 Slovakia, belonging to the institution) and Michal MIKL (203 Czech Republic, belonging to the institution).
Edition Kos, Greece, 25th European Signal Processing Conference (EUSIPCO), Kos, Greece. p. 2644-2648, 5 pp. 2017.
Publisher IEEE
Other information
Original language English
Type of outcome Proceedings paper
Field of Study 30103 Neurosciences
Country of publisher United States of America
Confidentiality degree is not subject to a state or trade secret
Publication form electronic version available online
WWW URL
RIV identification code RIV/00216224:14330/17:00095053
Organization unit Faculty of Informatics
ISBN 978-0-9928626-7-1
ISSN 2076-1465
Doi http://dx.doi.org/10.23919/EUSIPCO.2017.8081690
UT WoS 000426986000534
Keywords in English functional magnetic resonance imaging; network analysis; preprocessing
Tags firank_B
Tags International impact, Reviewed
Changed by Changed by: RNDr. Pavel Šmerk, Ph.D., učo 3880. Changed: 27/4/2018 11:04.
Abstract
Brain functional connectivity measured by functional magnetic resonance imaging was shown to be influenced by preprocessing procedures. We aim to describe this influence separately for different preprocessing factors and in 20 different most used preprocessing pipelines. We evaluate the effects of slice-timing correction and physiological noise filtering by RETROICOR, diverse levels of motion correction, and white matter, cerebrospinal fluid, and global signal filtering. With usage of three datasets, we show the impact on global metrics of restingstate functional brain networks and their reliability. We show negative effect of RETROICOR on reliability of metrics and disrupting effect of global signal regression on network topology. We do not support the use of slice-timing correction because it does not significantly influence any of the measured features. We also show that the selected types of preprocessing may affect averaged node strength, normalized clustering coefficient, normalized characteristic path length and modularity.
Links
GA14-33143S, research and development projectName: Vliv fyziologických procesů na reliabilitu a časovou proměnlivost konektivity v lidském mozku měřené pomocí fMRI
Investor: Czech Science Foundation
LM2015085, research and development projectName: CERIT Scientific Cloud (Acronym: CERIT-SC)
Investor: Ministry of Education, Youth and Sports of the CR, CERIT Scientific Cloud
LQ1601, research and development projectName: CEITEC 2020 (Acronym: CEITEC2020)
Investor: Ministry of Education, Youth and Sports of the CR
MUNI/A/0897/2016, interní kód MUName: Rozsáhlé výpočetní systémy: modely, aplikace a verifikace VI.
Investor: Masaryk University, Category A
MUNI/A/0945/2015, interní kód MUName: Rozsáhlé výpočetní systémy: modely, aplikace a verifikace V.
Investor: Masaryk University, Category A
MUNI/A/1206/2014, interní kód MUName: Zapojení studentů Fakulty informatiky do mezinárodní vědecké komunity (Acronym: SKOMU)
Investor: Masaryk University, Category A
PrintDisplayed: 26/4/2024 07:10