NEČASOVÁ, Ivona, Eliška JANOUŠKOVÁ, Tomáš KLUMPLER and Ctirad HOFR. Basic domain of telomere guardian TRF2 reduces D-loop unwinding whereas Rap1 restores it. Nucleic Acids Research. 2017, vol. 45, No 21, p. 12170-12180. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkx812.
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Basic information
Original name Basic domain of telomere guardian TRF2 reduces D-loop unwinding whereas Rap1 restores it
Authors NEČASOVÁ, Ivona (203 Czech Republic, belonging to the institution), Eliška JANOUŠKOVÁ (203 Czech Republic, belonging to the institution), Tomáš KLUMPLER (203 Czech Republic, belonging to the institution) and Ctirad HOFR (203 Czech Republic, guarantor, belonging to the institution).
Edition Nucleic Acids Research, 2017, 0305-1048.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 10610 Biophysics
Country of publisher United Kingdom of Great Britain and Northern Ireland
Confidentiality degree is not subject to a state or trade secret
WWW LifeB - Laboratory of interaction and function of essential biomolecules Basic domain of telomere guardian TRF2 reduces D-loop unwinding whereas Rap1 restores it
Impact factor Impact factor: 11.561
RIV identification code RIV/00216224:14740/17:00095119
Organization unit Central European Institute of Technology
Doi http://dx.doi.org/10.1093/nar/gkx812
UT WoS 000417691300016
Keywords in English TRF2; DNA; telomere; D-loop; Rap1
Tags MEDGENET, OA, rivok
Tags International impact, Reviewed
Changed by Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 23/3/2018 11:04.
Abstract
Telomeric repeat binding factor 2 (TRF2) folds human telomeres into loops to prevent unwanted DNA repair and chromosome end-joining. The N-terminal basic domain of TRF2 (B-domain) protects the telomeric displacement loop (D-loop) from cleavage by endonucleases. Repressor activator protein 1 (Rap1) binds TRF2 and improves telomeric DNA recognition. We found that the B-domain of TRF2 stabilized the D-loop and thus reduced unwinding by BLM and RPA, whereas the formation of the Rap1–TRF2 complex restored DNA unwinding. To understand how the B-domain of TRF2 affects DNA binding and D-loop processing, we analyzed DNA binding of full-length TRF2 and a truncated TRF2 construct lacking the B-domain. We quantified how the B-domain improves TRF2’s interaction with DNA via enhanced long-range electrostatic interactions. We developed a structural envelope model of the B-domain bound on DNA. The model revealed that the B-domain is flexible in solution but becomes rigid upon binding to telomeric DNA. We proposed a mechanism for how the B-domain stabilizes the D-loop.
Links
GA16-20255S, research and development projectName: Molekulární mechanismus inhibice telomerázy: cílené zastavení dělení nádorových buněk
Investor: Czech Science Foundation
LQ1601, research and development projectName: CEITEC 2020 (Acronym: CEITEC2020)
Investor: Ministry of Education, Youth and Sports of the CR
692298, interní kód MUName: MEDGENET - Medical genomics and epigenomics network (Acronym: MEDGENET)
Investor: European Union, Spreading excellence and widening participation
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