SNOPKOVÁ, Kateřina, Karel SEDLÁŘ, Juraj BOSÁK, Eva CHALOUPKOVÁ, Ivo SEDLÁČEK, Ivo PROVAZNÍK and David ŠMAJS. Free-Living Enterobacterium Pragia fontium 24613: Complete Genome Sequence and Metabolic Profiling. Evolutionary Bioinformatics. London: Sage Publications LTD, 2017, vol. 13, No 1176934317700863, p. 1-7. ISSN 1176-9343. Available from: https://dx.doi.org/10.1177/1176934317700863.
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Basic information
Original name Free-Living Enterobacterium Pragia fontium 24613: Complete Genome Sequence and Metabolic Profiling
Authors SNOPKOVÁ, Kateřina (203 Czech Republic, belonging to the institution), Karel SEDLÁŘ (203 Czech Republic), Juraj BOSÁK (703 Slovakia, belonging to the institution), Eva CHALOUPKOVÁ (203 Czech Republic, belonging to the institution), Ivo SEDLÁČEK (203 Czech Republic, belonging to the institution), Ivo PROVAZNÍK (203 Czech Republic) and David ŠMAJS (203 Czech Republic, guarantor, belonging to the institution).
Edition Evolutionary Bioinformatics, London, Sage Publications LTD, 2017, 1176-9343.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 10602 Biology , Evolutionary biology
Country of publisher United Kingdom of Great Britain and Northern Ireland
Confidentiality degree is not subject to a state or trade secret
Impact factor Impact factor: 1.877
RIV identification code RIV/00216224:14110/17:00095198
Organization unit Faculty of Medicine
Doi http://dx.doi.org/10.1177/1176934317700863
UT WoS 000397968000001
Keywords in English Pragia fontium; Enterobacteriaceae; whole genome sequence; phylogeny; free-living bacteria
Tags EL OK, podil
Tags International impact, Reviewed
Changed by Changed by: Soňa Böhmová, učo 232884. Changed: 18/3/2018 15:29.
Abstract
Whole genome sequencing and metabolic fingerprinting confirmed the phylogenetic position of P. fontium inside the group of atypical H2S producers. Genomic data have revealed that P- fontium 24613 has limited pathogenic potential, although there are signs of genome decay. Although the lack of specific virulence factors and no association with a host species suggest a free-living style, the signs of genome decay suggest a proces of adaptation to an as-yet-unknown host.
Links
GA16-21649S, research and development projectName: Molekulární charakterizace nových bakteriocinů identifikovaných v rodech Escherichia a Shigella
Investor: Czech Science Foundation
MUNI/11/InGA04/2014, interní kód MUName: Alternativní antimikrobiální látky: studium vazby kolicinů na povrch patogenní bakterie
Investor: Masaryk University
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