Reanalysis of Chinese Treponema pallidum samples: all Chinese
samples cluster with SS14-like group of syphilis-causing
treponemes

J 2018

Reanalysis of Chinese Treponema pallidum samples: all Chinese samples cluster with SS14-like group of syphilis-causing treponemes

STROUHAL, Michal, Jan OPPELT, Lenka MIKALOVÁ, Natasha ARORA, Kay NIESELT et. al.

Basic information

Original name

Reanalysis of Chinese Treponema pallidum samples: all Chinese samples cluster with SS14-like group of syphilis-causing treponemes

Authors

STROUHAL, Michal (203 Czech Republic, belonging to the institution), Jan OPPELT (203 Czech Republic, belonging to the institution), Lenka MIKALOVÁ (203 Czech Republic, belonging to the institution), Natasha ARORA (756 Switzerland), Kay NIESELT (276 Germany), Fernando GONZÁLEZ-CANDELAS (724 Spain) and David ŠMAJS (203 Czech Republic)

Edition

BMC Research Notes, London, BioMed Central Ltd. 2018, 1756-0500

Other information

Language

English

Type of outcome

Článek v odborném periodiku

Field of Study

10606 Microbiology

Country of publisher

United Kingdom of Great Britain and Northern Ireland

Confidentiality degree

není předmětem státního či obchodního tajemství

References:

URL

RIV identification code

RIV/00216224:14110/18:00100799

Organization unit

Faculty of Medicine

DOI

http://dx.doi.org/10.1186/s13104-017-3106-7

Keywords in English

Genome sequencing; Phylogenetic analysis; Single nucleotide variant; SyphilisTreponema pallidum

Abstract

V originále

Treponema pallidum subsp. pallidum (TPA) is the causative agent of syphilis. Genetic analyses of TPA reference strains and human clinical isolates have revealed two genetically distinct groups of syphilis-causing treponemes, called Nichols-like and SS14-like groups. So far, no genetic intermediates, i.e. strains containing a mixed pattern of Nichols-like and SS14-like genomic sequences, have been identified. Recently, Sun et al. (Oncotarget 2016. https://doi.org/10.18632/oncotarget.10154) described a new “phylogenetic group” (called Lineage 2) among Chinese TPA strains. This lineage exhibited a “mosaic genomic structure” of Nichols-like and SS14-like lineages.

Links

GA17-25455S, research and development project

Name: Studium genomů patogenních treponem na základě analýzy jednotlivých buněk

Investor: Czech Science Foundation

MUNI/A/1171/2015, interní kód MU

Name: Molekulárně buněčná biologie pro biomedicínu

Investor: Masaryk University, Category A

Citovat

STROUHAL, Michal, Jan OPPELT, Lenka MIKALOVÁ, Natasha ARORA, Kay NIESELT, Fernando GONZÁLEZ-CANDELAS and David ŠMAJS. Reanalysis of Chinese Treponema pallidum samples: all Chinese samples cluster with SS14-like group of syphilis-causing treponemes. BMC Research Notes. London: BioMed Central Ltd., 2018, vol. 11, No 1, p. 1-5. ISSN 1756-0500. Available from: https://dx.doi.org/10.1186/s13104-017-3106-7.

@article{1405097,
   author = {Strouhal, Michal and Oppelt, Jan and Mikalová, Lenka and Arora, Natasha and Nieselt, Kay and GonzálezandCandelas, Fernando and Šmajs, David},
   article_location = {London},
   article_number = {1},
   doi = {http://dx.doi.org/10.1186/s13104-017-3106-7},
   keywords = {Genome sequencing; Phylogenetic analysis; Single nucleotide variant; SyphilisTreponema pallidum},
   language = {eng},
   issn = {1756-0500},
   journal = {BMC Research Notes},
   title = {Reanalysis of Chinese Treponema pallidum samples: all Chinese samples cluster with SS14-like group of syphilis-causing treponemes},
   url = {https://bmcresnotes.biomedcentral.com/articles/10.1186/s13104-017-3106-7},
   volume = {11},
   year = {2018}
}

TY  - JOUR
ID  - 1405097
AU  - Strouhal, Michal - Oppelt, Jan - Mikalová, Lenka - Arora, Natasha - Nieselt, Kay - González-Candelas, Fernando - Šmajs, David
PY  - 2018
TI  - Reanalysis of Chinese Treponema pallidum samples: all Chinese samples cluster with SS14-like group of syphilis-causing treponemes
JF  - BMC Research Notes
VL  - 11
IS  - 1
SP  - 1-5
EP  - 1-5
PB  - BioMed Central Ltd.
SN  - 17560500
KW  - Genome sequencing
KW  - Phylogenetic analysis
KW  - Single nucleotide variant
KW  - SyphilisTreponema pallidum
UR  - https://bmcresnotes.biomedcentral.com/articles/10.1186/s13104-017-3106-7
N2  - Treponema pallidum subsp. pallidum (TPA) is the causative agent of syphilis. Genetic analyses of TPA reference strains and human clinical isolates have revealed two genetically distinct groups of syphilis-causing treponemes, called Nichols-like and SS14-like groups. So far, no genetic intermediates, i.e. strains containing a mixed pattern of Nichols-like and SS14-like genomic sequences, have been identified. Recently, Sun et al. (Oncotarget 2016. https://doi.org/10.18632/oncotarget.10154) described a new “phylogenetic group” (called Lineage 2) among Chinese TPA strains. This lineage exhibited a “mosaic genomic structure” of Nichols-like and SS14-like lineages.
ER  -

STROUHAL, Michal, Jan OPPELT, Lenka MIKALOVÁ, Natasha ARORA, Kay NIESELT, Fernando GONZÁLEZ-CANDELAS and David ŠMAJS. Reanalysis of Chinese Treponema pallidum samples: all Chinese samples cluster with SS14-like group of syphilis-causing treponemes. \textit{BMC Research Notes}. London: BioMed Central Ltd., 2018, vol.~11, No~1, p.~1-5. ISSN~1756-0500. Available from: https://dx.doi.org/10.1186/s13104-017-3106-7.

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