GRAF, M., S. ARENZ, P. HUTER, A. DONHOFER, Jiří NOVÁČEK and D.N. WILSON. Cryo-EM structure of the spinach chloroplast ribosome reveals the location of plastid-specific ribosomal proteins and extensions. Nucleic Acids Research. Oxford: Oxford University Press, 2017, vol. 45, No 5, p. 2887-2896. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkw1272.
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Basic information
Original name Cryo-EM structure of the spinach chloroplast ribosome reveals the location of plastid-specific ribosomal proteins and extensions
Authors GRAF, M. (276 Germany), S. ARENZ (276 Germany), P. HUTER (276 Germany), A. DONHOFER (276 Germany), Jiří NOVÁČEK (203 Czech Republic, guarantor, belonging to the institution) and D.N. WILSON (276 Germany).
Edition Nucleic Acids Research, Oxford, Oxford University Press, 2017, 0305-1048.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 10608 Biochemistry and molecular biology
Country of publisher United Kingdom of Great Britain and Northern Ireland
Confidentiality degree is not subject to a state or trade secret
WWW URL
Impact factor Impact factor: 11.561
RIV identification code RIV/00216224:14740/17:00100463
Organization unit Central European Institute of Technology
Doi http://dx.doi.org/10.1093/nar/gkw1272
UT WoS 000397286600059
Keywords in English TRANSLATION INITIATION; ANGSTROM RESOLUTION; MITOCHONDRIAL RIBOSOME; ELECTRON-MICROSCOPY; COLI RIBOSOME; S SUBUNIT; IDENTIFICATION; PARTICLE; SYSTEM; MODEL
Tags CF CRYO, rivok
Tags International impact, Reviewed
Changed by Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 22/3/2018 14:29.
Abstract
Ribosomes are the protein synthesizing machines of the cell. Recent advances in cryo-EM have led to the determination of structures from a variety of species, including bacterial 70S and eukaryotic 80S ribosomes as well as mitoribosomes from eukaryotic mitochondria, however, to date high resolution structures of plastid 70S ribosomes have been lacking. Here we present a cryo-EM structure of the spinach chloroplast 70S ribosome, with an average resolution of 5.4 A for the small 30S subunit and 3.6 A for the large 50S ribosomal subunit. The structure reveals the location of the plastid-specific ribosomal proteins (RPs) PSRP1, PSRP4, PSRP5 and PSRP6 as well as the numerous plastid-specific extensions of the RPs. We discover many features by which the plastid-specific extensions stabilize the ribosome via establishing additional interactions with surrounding ribosomal RNA and RPs. Moreover, we identify a large conglomerate of plastid-specific protein mass adjacent to the tunnel exit site that could facilitate interaction of the chloroplast ribosome with the thylakoid membrane and the protein-targeting machinery. Comparing the Escherichia coli 70S ribosome with that of the spinach chloroplast ribosome provides detailed insight into the co-evolution of RP and rRNA.
Links
LM2015043, research and development projectName: Česká infrastruktura pro integrativní strukturní biologii (Acronym: CIISB)
Investor: Ministry of Education, Youth and Sports of the CR
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