TROJÁK, Matej, David ŠAFRÁNEK, Jakub HRABEC, Jakub ŠALAGOVIČ, Jan ČERVENÝ and Matej HAJNAL. E-cyanobacterium.org: A Web-based Platform for Systems Biology of Cyanobacteria. 2016.
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Basic information
Original name E-cyanobacterium.org: A Web-based Platform for Systems Biology of Cyanobacteria
Name in Czech E-cyanobacterium.org: Webová platforma pre modelovanie siníc
Authors TROJÁK, Matej (703 Slovakia, belonging to the institution), David ŠAFRÁNEK (203 Czech Republic, belonging to the institution), Jakub HRABEC (203 Czech Republic, belonging to the institution), Jakub ŠALAGOVIČ (703 Slovakia, belonging to the institution), Jan ČERVENÝ (203 Czech Republic, belonging to the institution) and Matej HAJNAL (703 Slovakia, belonging to the institution).
Edition 2016.
Other information
Original language English
Type of outcome Software
Field of Study 10201 Computer sciences, information science, bioinformatics
Country of publisher Czech Republic
Confidentiality degree is not subject to a state or trade secret
WWW URL
RIV identification code RIV/00216224:14330/16:00101019
Organization unit Faculty of Informatics
Keywords in English systems biology; cyanobacteria; database; annotation
Technical parameters webová aplikace
Tags International impact, Reviewed
Changed by Changed by: RNDr. Matej Troják, Ph.D., učo 410129. Changed: 22/6/2018 14:30.
Abstract
E-cyanobacterium.org is an online platform providing tools for public sharing, annotation, analysis, and visualisation of dynamical models and wet-lab experiments related to cyanobacteria. The platform is unique in integrating abstract mathematical models with a precise consortium-agreed biochemical description provided in a rule-based formalism. The general aim is to stimulate collaboration between experimental and computational systems biologists to achieve a better understanding of cyanobacteria.
Abstract (in Czech)
Nástroj poskytuje online platformu pre zdieľanie, anotáciu, analýzu a vizualizáciu dynamických modelov a experimentov týkajúcich sa siníc. Unikátnosť výsledku je v integrovaní matematických modelov s biochemickým popisom pomocou modelovania založeného na pravidlách.
Links
GA15-11089S, research and development projectName: Získávání parametrů biologických modelů pomocí techniky ověřování modelů
Investor: Czech Science Foundation
LM2015055, research and development projectName: Centrum pro systémovou biologii (Acronym: C4SYS)
Investor: Ministry of Education, Youth and Sports of the CR
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