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@misc{1421800,
author = {Troják, Matej and Šafránek, David and Šalagovič, Jakub},
keywords = {systems biology; rule-based language; analysis},
language = {eng},
institution = {Fakulta informatiky, Masarykova univerzita},
organization = {Fakulta informatiky, Masarykova univerzita},
title = {BCSgen: Biochemical Space language software tool},
url = {https://sybila.fi.muni.cz/tools_html/bsgen.html},
year = {2017}
}
TY -
ID - 1421800
AU - Troják, Matej - Šafránek, David - Šalagovič, Jakub
PY - 2017
TI - BCSgen: Biochemical Space language software tool
KW - systems biology
KW - rule-based language
KW - analysis
UR - https://sybila.fi.muni.cz/tools_html/bsgen.html
L2 - https://sybila.fi.muni.cz/tools_html/bsgen.html
N2 - BCSgen is a software providing basic functionality to write, maintain, and analyse models written in Biochemical Space Language (BCSL). The key features of the tool are: interactive editor which allows users to create and load models providing automatic syntax highlighting and errors reporting; transition system analysis allows to generate transition system for a given model and consequently analyse it (e.g. perform reachability analysis); simulation of a model with defined kinetic rates with either deterministic or stochastic approach; visualisation of simulated data in an interactive plot chart and visualisation of transition system in a web-based visualisation for exploration of whole space.
ER -
TROJÁK, Matej, David ŠAFRÁNEK and Jakub ŠALAGOVIČ. \textit{BCSgen: Biochemical Space language software tool}. 2017.
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