NEČASOVÁ, Tereza and David SVOBODA. Visual and Quantitative Comparison of Real and Simulated Biomedical Image Data. In Laura Leal-Taixé, Stefan Roth. Computer Vision – ECCV 2018 Workshops. LNCS 11134. Munich, Germany: Springer, 2019, p. 385-394. ISBN 978-3-030-11023-9. Available from: https://dx.doi.org/10.1007/978-3-030-11024-6_28.
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Basic information
Original name Visual and Quantitative Comparison of Real and Simulated Biomedical Image Data
Authors NEČASOVÁ, Tereza (203 Czech Republic, belonging to the institution) and David SVOBODA (203 Czech Republic, belonging to the institution).
Edition LNCS 11134. Munich, Germany, Computer Vision – ECCV 2018 Workshops, p. 385-394, 10 pp. 2019.
Publisher Springer
Other information
Original language English
Type of outcome Proceedings paper
Field of Study 10201 Computer sciences, information science, bioinformatics
Country of publisher Germany
Confidentiality degree is not subject to a state or trade secret
Publication form printed version "print"
WWW URL
Impact factor Impact factor: 0.402 in 2005
RIV identification code RIV/00216224:14330/19:00107168
Organization unit Faculty of Informatics
ISBN 978-3-030-11023-9
ISSN 0302-9743
Doi http://dx.doi.org/10.1007/978-3-030-11024-6_28
UT WoS 000594200000028
Keywords in English Feature comparison; Validation of simulation; Statistical evaluation; Similarity visualisation
Tags cbia-web
Tags International impact, Reviewed
Changed by Changed by: RNDr. Pavel Šmerk, Ph.D., učo 3880. Changed: 27/4/2020 22:24.
Abstract
The simulations in biomedical image analysis provide a solution when the real image data are difficult to be annotated or if they are available only in small quantities. The progress in simulations rapidly grows in the recent years. Nevertheless, the comparative techniques for the assessment of the plausibility of generated data are still unsatisfactory or none. This paper aims to point out the problem of insufficient comparison of real and synthetic data, which is done in many cases only by visual inspection or based on subjective measurements. The selected texture features are first compared in a univariate manner by quantile-quantile plots and Kolmogorov-Smirnov test. The evaluation is then extended into multivariate assessment using the PCA for a visualization and furthermore for a quantitative measure of similarity by Jaccard index. Two different image datasets were used to show the results and the importance of the validation of simulated data in many aspects.
Links
GA17-05048S, research and development projectName: Segmentace a trekování živých buněk v multimodálních obrazech
Investor: Czech Science Foundation
MUNI/A/0854/2017, interní kód MUName: Rozsáhlé výpočetní systémy: modely, aplikace a verifikace VII.
Investor: Masaryk University, Category A
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