DEMKO, Martin, Samuel PASTVA, David ŠAFRÁNEK, Nikola BENEŠ and Luboš BRIM. PITHYA. 2018.
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Basic information
Original name PITHYA
Name in Czech PITHYA
Authors DEMKO, Martin (703 Slovakia, belonging to the institution), Samuel PASTVA (703 Slovakia, belonging to the institution), David ŠAFRÁNEK (203 Czech Republic, belonging to the institution), Nikola BENEŠ (203 Czech Republic, belonging to the institution) and Luboš BRIM (203 Czech Republic, belonging to the institution).
Edition 2018.
Other information
Original language English
Type of outcome Software
Field of Study 10201 Computer sciences, information science, bioinformatics
Country of publisher Czech Republic
Confidentiality degree is not subject to a state or trade secret
WWW online verzia zdrojovy kod
RIV identification code RIV/00216224:14330/18:00101130
Organization unit Faculty of Informatics
Keywords in English Parameter synthesis; Dynamical systems; Model checking; Temporal logic; ODE; Systems biology
Technical parameters Výsledkem je Webová aplikácia. Zdrojový kód je prístúpný cez GitHub a online verzia na adrese "http://pithya.ics.muni.cz". Pre GUI bol použitý primárne jazyk R a pre jadro systému jazyky Java a Kotlin.
Tags International impact
Changed by Changed by: prof. RNDr. Luboš Brim, CSc., učo 197. Changed: 16/1/2019 18:07.
Abstract
Complex dynamical systems arise in many areas such as biology, biophysics, economy, or social sciences. To study them, various kinds of models are used. Such models usually employ certain parameters that either represents unknown mechanics of the real-world system or serve as a way of tuning the behaviour of the system. A popular way of modelling dynamical systems is to employ the framework of differential equations with parameters. To find an analytical solution to these equations is often intractable due to the complexity of the system, the number of parameters and their interdependencies. A different approach is a novel high-performance tool - PITHYA - for a multi-parameter synthesis of dynamical systems from specifications expressed in a formal, temporal logic, formulae. PITHYA is based on the algorithm of parallel semi-symbolic coloured model checking technique.
Links
GA15-11089S, research and development projectName: Získávání parametrů biologických modelů pomocí techniky ověřování modelů
Investor: Czech Science Foundation
GA18-00178S, research and development projectName: Diskrétní bifurkační analýza reaktivních systémů
Investor: Czech Science Foundation
LM2015055, research and development projectName: Centrum pro systémovou biologii (Acronym: C4SYS)
Investor: Ministry of Education, Youth and Sports of the CR
MUNI/A/0854/2017, interní kód MUName: Rozsáhlé výpočetní systémy: modely, aplikace a verifikace VII.
Investor: Masaryk University, Category A
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