HRITZ, Jozef and Arnošt MLÁDEK. Computational Molecular Modeling Techniques of Biomacromolecular Systems. Online. In Jan Hejátko, Toshio Hakoshima. Plant Structural Biology: Hormonal Regulations. 1st ed. CHAM: SPRINGER INT PUBLISHING AG, 2018, p. 295-322. n/a. ISBN 978-3-319-91352-0. Available from: https://dx.doi.org/10.1007/978-3-319-91352-0_15.
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Basic information
Original name Computational Molecular Modeling Techniques of Biomacromolecular Systems
Authors HRITZ, Jozef (703 Slovakia, guarantor, belonging to the institution) and Arnošt MLÁDEK (203 Czech Republic, belonging to the institution).
Edition 1. vyd. CHAM, Plant Structural Biology: Hormonal Regulations, p. 295-322, 28 pp. n/a, 2018.
Publisher SPRINGER INT PUBLISHING AG
Other information
Original language English
Type of outcome Chapter(s) of a specialized book
Field of Study 10400 1.4 Chemical sciences
Country of publisher Switzerland
Confidentiality degree is not subject to a state or trade secret
Publication form electronic version available online
WWW URL
RIV identification code RIV/00216224:14740/18:00103861
Organization unit Central European Institute of Technology
ISBN 978-3-319-91352-0
Doi http://dx.doi.org/10.1007/978-3-319-91352-0_15
Keywords in English Molecular biology Plant development Signal transduction Arabidopsis X-ray crystallography NMR SAXS Molecular dynamics simulations
Tags rivok, topvydavatel
Tags International impact, Reviewed
Changed by Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 11/3/2019 10:38.
Abstract
Computational simulations are used to study the structural and dynamics properties of biomoleculer systems at atomistic resolution. Morover, the simuations also allow to access the energetics of studied systems that can be applied in free energy calculations. Free energy determines the thermodynamic stability and solubility of biomoleclacues in given solution, their affinities towards another biomolecules and their populations in available conformational states. Traditional molecular dynamics simulations of biomacromolecules in explicit water solvent technique are currently restricted to the microseconds time scale but this limitation can be overcome by variety of enhanced sampling computational simulations.
Links
LQ1601, research and development projectName: CEITEC 2020 (Acronym: CEITEC2020)
Investor: Ministry of Education, Youth and Sports of the CR
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