SALPLACHTA, Jiri, Marie HORKA, Filip RŮŽIČKA and Karel SLAIS. Identification of bacterial uropathogens by preparative isoelectric focusing and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Journal of Chromatography A. Amsterdam, Netherlands: Elsevier, 2018, vol. 1532, JAN 12 2018, p. 232-237. ISSN 0021-9673. Available from: https://dx.doi.org/10.1016/j.chroma.2017.11.072.
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Basic information
Original name Identification of bacterial uropathogens by preparative isoelectric focusing and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
Authors SALPLACHTA, Jiri (203 Czech Republic, guarantor), Marie HORKA (203 Czech Republic), Filip RŮŽIČKA (203 Czech Republic, belonging to the institution) and Karel SLAIS (203 Czech Republic).
Edition Journal of Chromatography A, Amsterdam, Netherlands, Elsevier, 2018, 0021-9673.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 10606 Microbiology
Country of publisher Netherlands
Confidentiality degree is not subject to a state or trade secret
Impact factor Impact factor: 3.858
RIV identification code RIV/00216224:14110/18:00106895
Organization unit Faculty of Medicine
Doi http://dx.doi.org/10.1016/j.chroma.2017.11.072
UT WoS 000423894500026
Keywords in English Bacteria; Infection; Isoelectric focusing; Mass spectrometry; Preparative; Urine
Tags 14110113, rivok
Tags International impact, Reviewed
Changed by Changed by: Soňa Böhmová, učo 232884. Changed: 2/5/2019 14:12.
Abstract
This study describes a new method for simultaneous identification of uropathogens in the case of poly bacterial urinary tract infections. The method utilizes recently developed preparative isoelectric focusing (IEF) in cellulose-based separation medium with a subsequent analysis by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS). Preparative IEF was successfully used for both purification and separation of bacteria, Escherichia coli (pI 4.6) and Staphylococcus aureus (pI 3.4), in urine samples. The focused zones of bacteria, localized by the positions of focused colored pI markers, were easily collected from the separation media after the IEF analysis and then unambiguously identified by MALDI-TOF MS. The proposed method enables the identification of bacteria in urine specimens when the concentration of individual bacteria is >= 10(4) cells mL(-1). Another benefit is the viability of bacteria extracted from the collected fractions after preparative IEF. (C) 2017 Elsevier B.V. All rights reserved.
Links
NV16-29916A, research and development projectName: Využití bakteriofágů v léčbě nozokomiálních infekcí spojených s multirezistencí či tvorbou biofilmu
VI20172020069, research and development projectName: Vývoj moderních instrumentálních metod pro rychlou detekci a identifikaci vybraných B-agens a toxinů (Acronym: VMIMRDIBT)
Investor: Ministry of the Interior of the CR
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