New endemic familial parkinsonism in south Moravia, Czech
Republic and its genetical background

J 2018

New endemic familial parkinsonism in south Moravia, Czech Republic and its genetical background

BARTONIKOVA, Tereza, Katerina MENSIKOVA, Kristyna KOLARIKOVA, Radek VODICKA, Radek VRTEL et. al.

Basic information

Original name

New endemic familial parkinsonism in south Moravia, Czech Republic and its genetical background

Authors

BARTONIKOVA, Tereza (203 Czech Republic), Katerina MENSIKOVA (203 Czech Republic, guarantor), Kristyna KOLARIKOVA (203 Czech Republic), Radek VODICKA (203 Czech Republic), Radek VRTEL (203 Czech Republic), Pavel OTRUBA (203 Czech Republic), Michaela KAISEROVA (203 Czech Republic), Miroslav VASTIK (203 Czech Republic), Lenka MIKULICOVA (203 Czech Republic), Josef OVCOKA (203 Czech Republic), Ludmila SACHOVA (203 Czech Republic), Frantisek DVORSKY (203 Czech Republic), Jiri KRSA (203 Czech Republic), Petr JUGAS (203 Czech Republic), Marek GODAVA (203 Czech Republic), Martin BAREŠ (203 Czech Republic, belonging to the institution), Vladimir JANOUT (203 Czech Republic), Petr HLUSTIK (203 Czech Republic), Martin PROCHAZKA (203 Czech Republic) and Petr KANOVSKY (203 Czech Republic)

Edition

Medicine, Philadelphia, Lippincott Williams & Wilkins, 2018, 0025-7974

Other information

Language

English

Type of outcome

Článek v odborném periodiku

Field of Study

30103 Neurosciences

Country of publisher

United States of America

Confidentiality degree

není předmětem státního či obchodního tajemství

Impact factor

Impact factor: 1.870

RIV identification code

RIV/00216224:14110/18:00105515

Organization unit

Faculty of Medicine

DOI

http://dx.doi.org/10.1097/MD.0000000000012313

UT WoS

000449338200030

Keywords in English

familial neurodegenerative parkinsonism; molecular-genetic background; population with long-lasting inbreeding behavior

Abstract

V originále

An increased prevalence of familial neurodegenerative parkinsonism or cognitive deterioration was recently found in a small region of southeastern Moravia. The aim of the study was to assess the genetic background of this familial disease. Variants in the ADH1C, EIF4G1, FBXO7, GBA + GBAP1, GIGYF2, HTRA2, LRRK2, MAPT, PRKN, DJ-1, PINK1, PLA2G6, SNCA, UCHL1, VPS35 genes were examined in 12 clinically positive probands of the pedigree in which familial atypical neurodegenerative parkinsonism was identified in previous epidemiological studies. Libraries were sequenced by massive parallel sequencing (MPS) on the Personal Genome Machine (PGM; Ion Torrent). Data were analyzed using Torrent Suite and IonReporter software. All variants were then verified and confirmed by Sanger sequencing. We identified 31 rare heterozygous variants: 11 missense variants, 3 synonymous variants, 8 variants in the UTR region, and 9 intronic variants. Six variants (rs1801334, rs33995883, rs35507033, rs781737269, rs779760087, and rs63750072) were evaluated as pathogenic by at least one in-silico predictor. No single "founder" pathogenic variant associated with parkinsonism has been found in any of the probands from researched pedigree. It may rather be assumed that the familial occurrence of this disease is caused by the combined influence of several "small-effect" genetic variants that accumulate in the population with long-lasting inbreeding behavior.

Citovat

BARTONIKOVA, Tereza, Katerina MENSIKOVA, Kristyna KOLARIKOVA, Radek VODICKA, Radek VRTEL, Pavel OTRUBA, Michaela KAISEROVA, Miroslav VASTIK, Lenka MIKULICOVA, Josef OVCOKA, Ludmila SACHOVA, Frantisek DVORSKY, Jiri KRSA, Petr JUGAS, Marek GODAVA, Martin BAREŠ, Vladimir JANOUT, Petr HLUSTIK, Martin PROCHAZKA and Petr KANOVSKY. New endemic familial parkinsonism in south Moravia, Czech Republic and its genetical background. Medicine. Philadelphia: Lippincott Williams & Wilkins, 2018, vol. 97, No 38, p. 1-7. ISSN 0025-7974. Available from: https://dx.doi.org/10.1097/MD.0000000000012313.

@article{1486816,
   author = {Bartonikova, Tereza and Mensikova, Katerina and Kolarikova, Kristyna and Vodicka, Radek and Vrtel, Radek and Otruba, Pavel and Kaiserova, Michaela and Vastik, Miroslav and Mikulicova, Lenka and Ovcoka, Josef and Sachova, Ludmila and Dvorsky, Frantisek and Krsa, Jiri and Jugas, Petr and Godava, Marek and Bareš, Martin and Janout, Vladimir and Hlustik, Petr and Prochazka, Martin and Kanovsky, Petr},
   article_location = {Philadelphia},
   article_number = {38},
   doi = {http://dx.doi.org/10.1097/MD.0000000000012313},
   keywords = {familial neurodegenerative parkinsonism; molecular-genetic background; population with long-lasting inbreeding behavior},
   language = {eng},
   issn = {0025-7974},
   journal = {Medicine},
   title = {New endemic familial parkinsonism in south Moravia, Czech Republic and its genetical background},
   volume = {97},
   year = {2018}
}

TY  - JOUR
ID  - 1486816
AU  - Bartonikova, Tereza - Mensikova, Katerina - Kolarikova, Kristyna - Vodicka, Radek - Vrtel, Radek - Otruba, Pavel - Kaiserova, Michaela - Vastik, Miroslav - Mikulicova, Lenka - Ovcoka, Josef - Sachova, Ludmila - Dvorsky, Frantisek - Krsa, Jiri - Jugas, Petr - Godava, Marek - Bareš, Martin - Janout, Vladimir - Hlustik, Petr - Prochazka, Martin - Kanovsky, Petr
PY  - 2018
TI  - New endemic familial parkinsonism in south Moravia, Czech Republic and its genetical background
JF  - Medicine
VL  - 97
IS  - 38
SP  - 1-7
EP  - 1-7
PB  - Lippincott Williams & Wilkins
SN  - 00257974
KW  - familial neurodegenerative parkinsonism
KW  - molecular-genetic background
KW  - population with long-lasting inbreeding behavior
N2  - An increased prevalence of familial neurodegenerative parkinsonism or cognitive deterioration was recently found in a small region of southeastern Moravia. The aim of the study was to assess the genetic background of this familial disease. Variants in the ADH1C, EIF4G1, FBXO7, GBA + GBAP1, GIGYF2, HTRA2, LRRK2, MAPT, PRKN, DJ-1, PINK1, PLA2G6, SNCA, UCHL1, VPS35 genes were examined in 12 clinically positive probands of the pedigree in which familial atypical neurodegenerative parkinsonism was identified in previous epidemiological studies. Libraries were sequenced by massive parallel sequencing (MPS) on the Personal Genome Machine (PGM; Ion Torrent). Data were analyzed using Torrent Suite and IonReporter software. All variants were then verified and confirmed by Sanger sequencing. We identified 31 rare heterozygous variants: 11 missense variants, 3 synonymous variants, 8 variants in the UTR region, and 9 intronic variants. Six variants (rs1801334, rs33995883, rs35507033, rs781737269, rs779760087, and rs63750072) were evaluated as pathogenic by at least one in-silico predictor. No single "founder" pathogenic variant associated with parkinsonism has been found in any of the probands from researched pedigree. It may rather be assumed that the familial occurrence of this disease is caused by the combined influence of several "small-effect" genetic variants that accumulate in the population with long-lasting inbreeding behavior.
ER  -

BARTONIKOVA, Tereza, Katerina MENSIKOVA, Kristyna KOLARIKOVA, Radek VODICKA, Radek VRTEL, Pavel OTRUBA, Michaela KAISEROVA, Miroslav VASTIK, Lenka MIKULICOVA, Josef OVCOKA, Ludmila SACHOVA, Frantisek DVORSKY, Jiri KRSA, Petr JUGAS, Marek GODAVA, Martin BAREŠ, Vladimir JANOUT, Petr HLUSTIK, Martin PROCHAZKA and Petr KANOVSKY. New endemic familial parkinsonism in south Moravia, Czech Republic and its genetical background. \textit{Medicine}. Philadelphia: Lippincott Williams \&{} Wilkins, 2018, vol.~97, No~38, p.~1-7. ISSN~0025-7974. Available from: https://dx.doi.org/10.1097/MD.0000000000012313.

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