The bio.tools registry of software tools and data resources for
the life sciences

J 2019

The bio.tools registry of software tools and data resources for the life sciences

ISON, Jon, Hans IENASESCU, Piotr CHMURA, Emil RYDZA, Hervé MÉNAGER et. al.

Basic information

Original name

The bio.tools registry of software tools and data resources for the life sciences

Authors

ISON, Jon (guarantor), Hans IENASESCU, Piotr CHMURA, Emil RYDZA, Hervé MÉNAGER, Matúš KALAŠ, Veit SCHWÄMMLE, Björn GRÜNING, Niall BEARD, Rodrigo LOPEZ, Severine DUVAUD, Heinz STOCKINGER, Bengt PERSSON, Radka SVOBODOVÁ VAŘEKOVÁ (203 Czech Republic, belonging to the institution), Tomáš RAČEK (203 Czech Republic, belonging to the institution), Jiří VONDRÁŠEK, Hedi PETERSON, Ahto SALUMETS, Inge JONASSEN, Rob HOOFT, Tommi NYRÖNEN, Alfonso VALENCIA, Salvador CAPELLA, Josep GELPÍ, Federico ZAMBELLI, Babis SAVAKIS, Brane LESKOŠEK, Kristoffer RAPACKI, Christophe BLANCHET, Rafael JIMENEZ, Arlindo OLIVEIRA, Gert VRIEND, Olivier COLLIN, Jacques van HELDEN, Peter LØNGREEN and Søren BRUNAK

Edition

GENOME BIOLOGY, LONDON, BIOMED CENTRAL LTD, 2019, 1474-760X

Other information

Language

English

Type of outcome

Článek v odborném periodiku

Field of Study

10201 Computer sciences, information science, bioinformatics

Country of publisher

United Kingdom of Great Britain and Northern Ireland

Confidentiality degree

není předmětem státního či obchodního tajemství

References:

URL

Impact factor

Impact factor: 10.806

RIV identification code

RIV/00216224:14740/19:00110410

Organization unit

Central European Institute of Technology

DOI

http://dx.doi.org/10.1186/s13059-019-1772-6

UT WoS

000480534400002

Keywords in English

bio.tools registry; life sciences

Abstract

V originále

Bioinformaticians and biologists rely increasingly upon workflows for the flexible utilization of the many life science tools that are needed to optimally convert data into knowledge. We outline a pan-European enterprise to provide a catalogue (https://bio.tools) of tools and databases that can be used in these workflows. bio.tools not only lists where to find resources, but also provides a wide variety of practical information.

Links

676559, interní kód MU

Name: ELIXIR-EXCELERATE: Fast-track ELIXIR implementation and drive early user exploitation across the life-sciences (Acronym: ELIXIR-EXCELERATE)

Investor: European Union, RI Research Infrastructures (Excellent Science)

Citovat

ISON, Jon, Hans IENASESCU, Piotr CHMURA, Emil RYDZA, Hervé MÉNAGER, Matúš KALAŠ, Veit SCHWÄMMLE, Björn GRÜNING, Niall BEARD, Rodrigo LOPEZ, Severine DUVAUD, Heinz STOCKINGER, Bengt PERSSON, Radka SVOBODOVÁ VAŘEKOVÁ, Tomáš RAČEK, Jiří VONDRÁŠEK, Hedi PETERSON, Ahto SALUMETS, Inge JONASSEN, Rob HOOFT, Tommi NYRÖNEN, Alfonso VALENCIA, Salvador CAPELLA, Josep GELPÍ, Federico ZAMBELLI, Babis SAVAKIS, Brane LESKOŠEK, Kristoffer RAPACKI, Christophe BLANCHET, Rafael JIMENEZ, Arlindo OLIVEIRA, Gert VRIEND, Olivier COLLIN, Jacques van HELDEN, Peter LØNGREEN and Søren BRUNAK. The bio.tools registry of software tools and data resources for the life sciences. GENOME BIOLOGY. LONDON: BIOMED CENTRAL LTD, 2019, vol. 20, No 164, p. 1-4. ISSN 1474-760X. Available from: https://dx.doi.org/10.1186/s13059-019-1772-6.

@article{1549416,
   author = {Ison, Jon and Ienasescu, Hans and Chmura, Piotr and Rydza, Emil and Ménager, Hervé and Kalaš, Matúš and Schwämmle, Veit and Grüning, Björn and Beard, Niall and Lopez, Rodrigo and Duvaud, Severine and Stockinger, Heinz and Persson, Bengt and Svobodová Vařeková, Radka and Raček, Tomáš and Vondrášek, Jiří and Peterson, Hedi and Salumets, Ahto and Jonassen, Inge and Hooft, Rob and Nyrönen, Tommi and Valencia, Alfonso and Capella, Salvador and Gelpí, Josep and Zambelli, Federico and Savakis, Babis and Leskošek, Brane and Rapacki, Kristoffer and Blanchet, Christophe and Jimenez, Rafael and Oliveira, Arlindo and Vriend, Gert and Collin, Olivier and Helden, Jacques van and Løngreen, Peter and Brunak, Søren},
   article_location = {LONDON},
   article_number = {164},
   doi = {http://dx.doi.org/10.1186/s13059-019-1772-6},
   keywords = {bio.tools registry; life sciences},
   language = {eng},
   issn = {1474-760X},
   journal = {GENOME BIOLOGY},
   title = {The bio.tools registry of software tools and data resources for the life sciences},
   url = {https://doi.org/10.1186/s13059-019-1772-6},
   volume = {20},
   year = {2019}
}

TY  - JOUR
ID  - 1549416
AU  - Ison, Jon - Ienasescu, Hans - Chmura, Piotr - Rydza, Emil - Ménager, Hervé - Kalaš, Matúš - Schwämmle, Veit - Grüning, Björn - Beard, Niall - Lopez, Rodrigo - Duvaud, Severine - Stockinger, Heinz - Persson, Bengt - Svobodová Vařeková, Radka - Raček, Tomáš - Vondrášek, Jiří - Peterson, Hedi - Salumets, Ahto - Jonassen, Inge - Hooft, Rob - Nyrönen, Tommi - Valencia, Alfonso - Capella, Salvador - Gelpí, Josep - Zambelli, Federico - Savakis, Babis - Leskošek, Brane - Rapacki, Kristoffer - Blanchet, Christophe - Jimenez, Rafael - Oliveira, Arlindo - Vriend, Gert - Collin, Olivier - Helden, Jacques van - Løngreen, Peter - Brunak, Søren
PY  - 2019
TI  - The bio.tools registry of software tools and data resources for the life sciences
JF  - GENOME BIOLOGY
VL  - 20
IS  - 164
SP  - 1-4
EP  - 1-4
PB  - BIOMED CENTRAL LTD
SN  - 1474760X
KW  - bio.tools registry
KW  - life sciences
UR  - https://doi.org/10.1186/s13059-019-1772-6
L2  - https://doi.org/10.1186/s13059-019-1772-6
N2  - Bioinformaticians and biologists rely increasingly upon workflows for the flexible utilization of the many life science tools that are needed to optimally convert data into knowledge. We outline a pan-European enterprise to provide a catalogue (https://bio.tools) of tools and databases that can be used in these workflows. bio.tools not only lists where to find resources, but also provides a wide variety of practical information.
ER  -

ISON, Jon, Hans IENASESCU, Piotr CHMURA, Emil RYDZA, Hervé MÉNAGER, Matúš KALAŠ, Veit SCHWÄMMLE, Björn GRÜNING, Niall BEARD, Rodrigo LOPEZ, Severine DUVAUD, Heinz STOCKINGER, Bengt PERSSON, Radka SVOBODOVÁ VAŘEKOVÁ, Tomáš RAČEK, Jiří VONDRÁŠEK, Hedi PETERSON, Ahto SALUMETS, Inge JONASSEN, Rob HOOFT, Tommi NYRÖNEN, Alfonso VALENCIA, Salvador CAPELLA, Josep GELPÍ, Federico ZAMBELLI, Babis SAVAKIS, Brane LESKOŠEK, Kristoffer RAPACKI, Christophe BLANCHET, Rafael JIMENEZ, Arlindo OLIVEIRA, Gert VRIEND, Olivier COLLIN, Jacques van HELDEN, Peter LØNGREEN and Søren BRUNAK. The bio.tools registry of software tools and data resources for the life sciences. \textit{GENOME BIOLOGY}. LONDON: BIOMED CENTRAL LTD, 2019, vol.~20, No~164, p.~1-4. ISSN~1474-760X. Available from: https://dx.doi.org/10.1186/s13059-019-1772-6.

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