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@article{1591638,
author = {Snopková, Kateřina and Čejková, Darina and Dufková, Kristýna and Sedláček, Ivo and Šmajs, David},
article_location = {New York},
article_number = {3},
doi = {http://dx.doi.org/10.1007/s00203-019-01755-4},
keywords = {Pseudomonas prosekii; Extremophile; Psychrotolerant; Cold adaptation; James Ross Island; Antarctica},
language = {eng},
issn = {0302-8933},
journal = {Archives of Microbiology},
title = {Genome sequences of two Antarctic strains of Pseudomonas prosekii: insights into adaptation to extreme conditions},
url = {https://link.springer.com/article/10.1007%2Fs00203-019-01755-4},
volume = {202},
year = {2020}
}
TY - JOUR
ID - 1591638
AU - Snopková, Kateřina - Čejková, Darina - Dufková, Kristýna - Sedláček, Ivo - Šmajs, David
PY - 2020
TI - Genome sequences of two Antarctic strains of Pseudomonas prosekii: insights into adaptation to extreme conditions
JF - Archives of Microbiology
VL - 202
IS - 3
SP - 447-454
EP - 447-454
PB - Springer
SN - 03028933
KW - Pseudomonas prosekii
KW - Extremophile
KW - Psychrotolerant
KW - Cold adaptation
KW - James Ross Island
KW - Antarctica
UR - https://link.springer.com/article/10.1007%2Fs00203-019-01755-4
L2 - https://link.springer.com/article/10.1007%2Fs00203-019-01755-4
N2 - Pseudomonas prosekii is a recently described species isolated exclusively from James Ross Island close to the Antarctic Peninsula at 64 degrees south latitude. Here, we present two P. prosekii genome sequences and their analyses with respect to phylogeny, low temperature adaptation, and potential biotechnological applications. The genome of P. prosekii P2406 comprised 5,896,482 bp and 5324 genes (GC content of 59.71%); the genome of P. prosekii P2673 consisted of 6,087,670 bp and 5511 genes (GC content of 59.50%). Whole genome sequence comparisons confirmed a close relationship between both investigated strains and strain P. prosekii LMG 26867(T). Gene mining revealed the presence of genes involved in stress response, genes encoding cold shock proteins, oxidative stress proteins, osmoregulation proteins, genes for the synthesis of protection molecules, and siderophores. Comparative genome analysis of P. prosekii and P. aeruginosa PAO1 highlighted differences in genome content between extremophile species and a mesophilic opportunistic pathogen.
ER -
SNOPKOVÁ, Kateřina, Darina ČEJKOVÁ, Kristýna DUFKOVÁ, Ivo SEDLÁČEK and David ŠMAJS. Genome sequences of two Antarctic strains of Pseudomonas prosekii: insights into adaptation to extreme conditions. \textit{Archives of Microbiology}. New York: Springer, 2020, vol.~202, No~3, p.~447-454. ISSN~0302-8933. Available from: https://dx.doi.org/10.1007/s00203-019-01755-4.
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