TSAGIOPOULOU, M., N. PAPAKONSTANTINOU, T. MOYSIADIS, L. MANSOURI, V. LJUNGSTROM, M. DURAN-FERRER, A. MALOUSI, A.C. QUEIROS, Karla PLEVOVÁ, S. BHOI, P. KOLLIA, D. OSCIER, A. ANAGNOSTOPOULOS, L. TRENTIN, M. RITGEN, Šárka POSPÍŠILOVÁ, N. STAVROYIANNI, P. GHIA, J.I. MARTIN-SUBERO, C. POTT, R. ROSENQUIST and K. STAMATOPOULOS. DNA methylation profiles in chronic lymphocytic leukemia patients treated with chemoimmunotherapy. CLINICAL EPIGENETICS. LONDON: BMC, 2019, vol. 11, No 1, p. 177-188. ISSN 1868-7075. Available from: https://dx.doi.org/10.1186/s13148-019-0783-1.
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Basic information
Original name DNA methylation profiles in chronic lymphocytic leukemia patients treated with chemoimmunotherapy
Authors TSAGIOPOULOU, M. (300 Greece), N. PAPAKONSTANTINOU (300 Greece), T. MOYSIADIS (300 Greece), L. MANSOURI (752 Sweden), V. LJUNGSTROM (752 Sweden), M. DURAN-FERRER (724 Spain), A. MALOUSI (300 Greece), A.C. QUEIROS (724 Spain), Karla PLEVOVÁ (203 Czech Republic, belonging to the institution), S. BHOI (752 Sweden), P. KOLLIA (300 Greece), D. OSCIER (826 United Kingdom of Great Britain and Northern Ireland), A. ANAGNOSTOPOULOS (300 Greece), L. TRENTIN (380 Italy), M. RITGEN (276 Germany), Šárka POSPÍŠILOVÁ (203 Czech Republic, guarantor, belonging to the institution), N. STAVROYIANNI (300 Greece), P. GHIA (380 Italy), J.I. MARTIN-SUBERO (724 Spain), C. POTT (380 Italy), R. ROSENQUIST (752 Sweden) and K. STAMATOPOULOS (300 Greece).
Edition CLINICAL EPIGENETICS, LONDON, BMC, 2019, 1868-7075.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 30204 Oncology
Country of publisher United Kingdom of Great Britain and Northern Ireland
Confidentiality degree is not subject to a state or trade secret
WWW URL
Impact factor Impact factor: 5.028
RIV identification code RIV/00216224:14740/19:00113009
Organization unit Central European Institute of Technology
Doi http://dx.doi.org/10.1186/s13148-019-0783-1
UT WoS 000501362500005
Keywords in English DNA methylation; Chemoimmunotherapy; CLL; Microarray analysis; Relapse
Tags 14110212, podil, rivok
Tags International impact, Reviewed
Changed by Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 19/2/2020 14:45.
Abstract
Background In order to gain insight into the contribution of DNA methylation to disease progression of chronic lymphocytic leukemia (CLL), using 450K Illumina arrays, we determined the DNA methylation profiles in paired pre-treatment/relapse samples from 34 CLL patients treated with chemoimmunotherapy, mostly (n = 31) with the fludarabine-cyclophosphamide-rituximab (FCR) regimen. Results The extent of identified changes in CLL cells versus memory B cells from healthy donors was termed "epigenetic burden" (EB) whereas the number of changes between the pre-treatment versus the relapse sample was termed "relapse changes" (RC). Significant (p < 0.05) associations were identified between (i) high EB and short time-to-first-treatment (TTFT); and, (ii) few RCs and short time-to-relapse. Both the EB and the RC clustered in specific genomic regions and chromatin states, including regulatory regions containing binding sites of transcription factors implicated in B cell and CLL biology. Conclusions Overall, we show that DNA methylation in CLL follows different dynamics in response to chemoimmunotherapy. These epigenetic alterations were linked with specific clinical and biological features.
Links
LQ1601, research and development projectName: CEITEC 2020 (Acronym: CEITEC2020)
Investor: Ministry of Education, Youth and Sports of the CR
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