FÍLA, Jan, Božena KLODOVÁ, David POTĚŠIL, Miloslav JUŘÍČEK, Petr ŠESTÁK, Zbyněk ZDRÁHAL and David HONYS. The Beta Subunit of Nascent Polypeptide Associated Complex Plays A Role in Flowers and Siliques Development of Arabidopsis thaliana. International Journal of Molecular Sciences. Basel: MDPI, 2020, vol. 21, No 6, p. 1-30. ISSN 1422-0067. Available from: https://dx.doi.org/10.3390/ijms21062065.
Other formats:   BibTeX LaTeX RIS
Basic information
Original name The Beta Subunit of Nascent Polypeptide Associated Complex Plays A Role in Flowers and Siliques Development of Arabidopsis thaliana
Authors FÍLA, Jan (203 Czech Republic), Božena KLODOVÁ (203 Czech Republic), David POTĚŠIL (203 Czech Republic, belonging to the institution), Miloslav JUŘÍČEK, Petr ŠESTÁK, Zbyněk ZDRÁHAL (203 Czech Republic, guarantor, belonging to the institution) and David HONYS.
Edition International Journal of Molecular Sciences, Basel, MDPI, 2020, 1422-0067.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 10608 Biochemistry and molecular biology
Country of publisher Switzerland
Confidentiality degree is not subject to a state or trade secret
WWW fulltext
Impact factor Impact factor: 5.923
RIV identification code RIV/00216224:14740/20:00114234
Organization unit Central European Institute of Technology
Doi http://dx.doi.org/10.3390/ijms21062065
UT WoS 000529890200161
Keywords in English Arabidopsis thaliana; chaperone; flower bud proteome; flower bud transcriptome; male gametophyte; nascent polypeptide-associated complex
Tags CF PROT, rivok
Changed by Changed by: Mgr. Marie Šípková, DiS., učo 437722. Changed: 31/8/2021 16:31.
Abstract
The nascent polypeptide-associated (NAC) complex was described in yeast as a heterodimer composed of two subunits, alpha and beta, and was shown to bind to the nascent polypeptides newly emerging from the ribosomes. NAC function was widely described in yeast and several information are also available about its role in plants. The knock down of individual NAC subunit(s) led usually to a higher sensitivity to stress. In Arabidopsis thaliana genome, there are five genes encoding NAC alpha subunit, and two genes encoding NAC beta. Double homozygous mutant in both genes coding for NAC beta was acquired, which showed a delayed development compared to the wild type, had abnormal number of flower organs, shorter siliques and greatly reduced seed set. Both NAC beta genes were characterized in more detail-the phenotype of the double homozygous mutant was complemented by a functional NAC beta copy. Then, both NAC beta genes were localized to nuclei and cytoplasm and their promoters were active in many organs (leaves, cauline leaves, flowers, pollen grains, and siliques together with seeds). Since flowers were the most affected organs by nac beta mutation, the flower buds' transcriptome was identified by RNA sequencing, and their proteome by gel-free approach. The differential expression analyses of transcriptomic and proteomic datasets suggest the involvement of NAC beta subunits in stress responses, male gametophyte development, and photosynthesis.
Links
EF16_019/0000738, research and development projectName: Centrum experimentální biologie rostlin
GA18-02448S, research and development projectName: Úloha translačních iniciačních faktorů při skladování a aktivaci transkriptů v samčí zárodečné linii krytosemenných rostlin
Investor: Czech Science Foundation
LM2018127, research and development projectName: Česká infrastruktura pro integrativní strukturní biologii (Acronym: CIISB)
Investor: Ministry of Education, Youth and Sports of the CR
LM2018140, research and development projectName: e-Infrastruktura CZ (Acronym: e-INFRA CZ)
Investor: Ministry of Education, Youth and Sports of the CR
PrintDisplayed: 11/5/2024 20:29