HORKA, Marie, Jiri SALPLACHTA, Pavel KARASEK, Filip RŮŽIČKA and Michal ROTH. Online Concentration of Bacteria from Tens of Microliter Sample Volumes in Roughened Fused Silica Capillary with Subsequent Analysis by Capillary Electrophoresis and Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry. ACS INFECTIOUS DISEASES. WASHINGTON: AMER CHEMICAL SOC, 2020, vol. 6, No 3, p. 355-365. ISSN 2373-8227. Available from: https://dx.doi.org/10.1021/acsinfecdis.9b00200.
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Basic information
Original name Online Concentration of Bacteria from Tens of Microliter Sample Volumes in Roughened Fused Silica Capillary with Subsequent Analysis by Capillary Electrophoresis and Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry
Authors HORKA, Marie (203 Czech Republic, guarantor), Jiri SALPLACHTA (203 Czech Republic), Pavel KARASEK (203 Czech Republic), Filip RŮŽIČKA (203 Czech Republic, belonging to the institution) and Michal ROTH (203 Czech Republic).
Edition ACS INFECTIOUS DISEASES, WASHINGTON, AMER CHEMICAL SOC, 2020, 2373-8227.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 30104 Pharmacology and pharmacy
Country of publisher United States of America
Confidentiality degree is not subject to a state or trade secret
WWW URL
Impact factor Impact factor: 5.084
RIV identification code RIV/00216224:14110/20:00114810
Organization unit Faculty of Medicine
Doi http://dx.doi.org/10.1021/acsinfecdis.9b00200
UT WoS 000526415000003
Keywords in English capillary electrophoresis; matrix-assisted laser desorption/ionization time-of-flight mass spectrometry; roughened capillary; cell-surface adhesion; Staphylococcus aureus; Pseudomonas aeruginosa
Tags 14110113, rivok
Tags International impact, Reviewed
Changed by Changed by: Mgr. Tereza Miškechová, učo 341652. Changed: 19/8/2020 12:57.
Abstract
This study presents a timely, reliable, and sensitive method for identification of pathogenic bacteria in clinical samples based on a combination of capillary electrophoresis with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. In this respect, a part of a single-piece fused silica capillary was etched with supercritical water with the aim of using it for static or dynamic cell-surface adhesion from tens of microliter sample volumes. The conditions for this procedure were optimized. Adhered cells of Staphylococcus aureus (methicillinsusceptible or methicillin-resistant) and of Pseudomonas aeruginosa were desorbed and preconcentrated from the rough part of the capillary surface using transient isotachophoretic stacking from a high conductivity model matrix. The charged cells were swep and separated again in micellar electrokinetic chromatography using a nonionogenic surfactant. Static adhesion of the cells onto the roughened part of the capillary is certainly volumetric limited. Dynamic adhesion allows the concentration of bacteria from 100 mu L volumes of physiological saline solution, bovine serum, or human blood with the limits of detection at 1.8 x 10(2), 1.7 x 10(3), and 1.0 x 10(3) cells mL(-1), respectively. The limits of detection were the same for all three examined bacterial strains. The recovery of the method was about 83% and it was independent of the sample matrix. A combination of capillary electrophoresis with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry required at least 4 x 103 cells mL-1 to obtain reliable results. The calibration plots were linear (R-2 = 0.99) and the relative standard deviations of the peak area were at most 2.2%. The adhered bacteria, either individual or in a mixture, were online analyzed by micellar electrokinetic chromatography and then collected from the capillary and off-line analyzed by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry without interfering matrix components.
Links
NV16-29916A, research and development projectName: Využití bakteriofágů v léčbě nozokomiálních infekcí spojených s multirezistencí či tvorbou biofilmu
VI20172020069, research and development projectName: Vývoj moderních instrumentálních metod pro rychlou detekci a identifikaci vybraných B-agens a toxinů (Acronym: VMIMRDIBT)
Investor: Ministry of the Interior of the CR
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