Online Concentration of Bacteria from Tens of Microliter Sample
Volumes in Roughened Fused Silica Capillary with Subsequent
Analysis by Capillary Electrophoresis and Matrix-Assisted Laser
Desorption/Ionization Time-of-Flight Mass Spectrometry

J 2020

Online Concentration of Bacteria from Tens of Microliter Sample Volumes in Roughened Fused Silica Capillary with Subsequent Analysis by Capillary Electrophoresis and Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry

HORKA, Marie, Jiri SALPLACHTA, Pavel KARASEK, Filip RŮŽIČKA, Michal ROTH et. al.

Basic information

Original name

Online Concentration of Bacteria from Tens of Microliter Sample Volumes in Roughened Fused Silica Capillary with Subsequent Analysis by Capillary Electrophoresis and Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry

Authors

HORKA, Marie (203 Czech Republic, guarantor), Jiri SALPLACHTA (203 Czech Republic), Pavel KARASEK (203 Czech Republic), Filip RŮŽIČKA (203 Czech Republic, belonging to the institution) and Michal ROTH (203 Czech Republic)

Edition

ACS INFECTIOUS DISEASES, WASHINGTON, AMER CHEMICAL SOC, 2020, 2373-8227

Other information

Language

English

Type of outcome

Článek v odborném periodiku

Field of Study

30104 Pharmacology and pharmacy

Country of publisher

United States of America

Confidentiality degree

není předmětem státního či obchodního tajemství

References:

URL

Impact factor

Impact factor: 5.084

RIV identification code

RIV/00216224:14110/20:00114810

Organization unit

Faculty of Medicine

DOI

http://dx.doi.org/10.1021/acsinfecdis.9b00200

UT WoS

000526415000003

Keywords in English

capillary electrophoresis; matrix-assisted laser desorption/ionization time-of-flight mass spectrometry; roughened capillary; cell-surface adhesion; Staphylococcus aureus; Pseudomonas aeruginosa

Abstract

V originále

This study presents a timely, reliable, and sensitive method for identification of pathogenic bacteria in clinical samples based on a combination of capillary electrophoresis with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. In this respect, a part of a single-piece fused silica capillary was etched with supercritical water with the aim of using it for static or dynamic cell-surface adhesion from tens of microliter sample volumes. The conditions for this procedure were optimized. Adhered cells of Staphylococcus aureus (methicillinsusceptible or methicillin-resistant) and of Pseudomonas aeruginosa were desorbed and preconcentrated from the rough part of the capillary surface using transient isotachophoretic stacking from a high conductivity model matrix. The charged cells were swep and separated again in micellar electrokinetic chromatography using a nonionogenic surfactant. Static adhesion of the cells onto the roughened part of the capillary is certainly volumetric limited. Dynamic adhesion allows the concentration of bacteria from 100 mu L volumes of physiological saline solution, bovine serum, or human blood with the limits of detection at 1.8 x 10(2), 1.7 x 10(3), and 1.0 x 10(3) cells mL(-1), respectively. The limits of detection were the same for all three examined bacterial strains. The recovery of the method was about 83% and it was independent of the sample matrix. A combination of capillary electrophoresis with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry required at least 4 x 103 cells mL-1 to obtain reliable results. The calibration plots were linear (R-2 = 0.99) and the relative standard deviations of the peak area were at most 2.2%. The adhered bacteria, either individual or in a mixture, were online analyzed by micellar electrokinetic chromatography and then collected from the capillary and off-line analyzed by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry without interfering matrix components.

Links

NV16-29916A, research and development project

Name: Využití bakteriofágů v léčbě nozokomiálních infekcí spojených s multirezistencí či tvorbou biofilmu

VI20172020069, research and development project

Name: Vývoj moderních instrumentálních metod pro rychlou detekci a identifikaci vybraných B-agens a toxinů (Acronym: VMIMRDIBT)

Investor: Ministry of the Interior of the CR

Citovat

HORKA, Marie, Jiri SALPLACHTA, Pavel KARASEK, Filip RŮŽIČKA and Michal ROTH. Online Concentration of Bacteria from Tens of Microliter Sample Volumes in Roughened Fused Silica Capillary with Subsequent Analysis by Capillary Electrophoresis and Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry. ACS INFECTIOUS DISEASES. WASHINGTON: AMER CHEMICAL SOC, 2020, vol. 6, No 3, p. 355-365. ISSN 2373-8227. Available from: https://dx.doi.org/10.1021/acsinfecdis.9b00200.

@article{1674768,
   author = {Horka, Marie and Salplachta, Jiri and Karasek, Pavel and Růžička, Filip and Roth, Michal},
   article_location = {WASHINGTON},
   article_number = {3},
   doi = {http://dx.doi.org/10.1021/acsinfecdis.9b00200},
   keywords = {capillary electrophoresis; matrix-assisted laser desorption/ionization time-of-flight mass spectrometry; roughened capillary; cell-surface adhesion; Staphylococcus aureus; Pseudomonas aeruginosa},
   language = {eng},
   issn = {2373-8227},
   journal = {ACS INFECTIOUS DISEASES},
   title = {Online Concentration of Bacteria from Tens of Microliter Sample Volumes in Roughened Fused Silica Capillary with Subsequent Analysis by Capillary Electrophoresis and Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry},
   url = {https://pubs.acs.org/doi/10.1021/acsinfecdis.9b00200#},
   volume = {6},
   year = {2020}
}

TY  - JOUR
ID  - 1674768
AU  - Horka, Marie - Salplachta, Jiri - Karasek, Pavel - Růžička, Filip - Roth, Michal
PY  - 2020
TI  - Online Concentration of Bacteria from Tens of Microliter Sample Volumes in Roughened Fused Silica Capillary with Subsequent Analysis by Capillary Electrophoresis and Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry
JF  - ACS INFECTIOUS DISEASES
VL  - 6
IS  - 3
SP  - 355-365
EP  - 355-365
PB  - AMER CHEMICAL SOC
SN  - 23738227
KW  - capillary electrophoresis
KW  - matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
KW  - roughened capillary
KW  - cell-surface adhesion
KW  - Staphylococcus aureus
KW  - Pseudomonas aeruginosa
UR  - https://pubs.acs.org/doi/10.1021/acsinfecdis.9b00200#
L2  - https://pubs.acs.org/doi/10.1021/acsinfecdis.9b00200#
N2  - This study presents a timely, reliable, and sensitive method for identification of pathogenic bacteria in clinical samples based on a combination of capillary electrophoresis with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. In this respect, a part of a single-piece fused silica capillary was etched with supercritical water with the aim of using it for static or dynamic cell-surface adhesion from tens of microliter sample volumes. The conditions for this procedure were optimized. Adhered cells of Staphylococcus aureus (methicillinsusceptible or methicillin-resistant) and of Pseudomonas aeruginosa were desorbed and preconcentrated from the rough part of the capillary surface using transient isotachophoretic stacking from a high conductivity model matrix. The charged cells were swep and separated again in micellar electrokinetic chromatography using a nonionogenic surfactant. Static adhesion of the cells onto the roughened part of the capillary is certainly volumetric limited. Dynamic adhesion allows the concentration of bacteria from 100 mu L volumes of physiological saline solution, bovine serum, or human blood with the limits of detection at 1.8 x 10(2), 1.7 x 10(3), and 1.0 x 10(3) cells mL(-1), respectively. The limits of detection were the same for all three examined bacterial strains. The recovery of the method was about 83% and it was independent of the sample matrix. A combination of capillary electrophoresis with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry required at least 4 x 103 cells mL-1 to obtain reliable results. The calibration plots were linear (R-2 = 0.99) and the relative standard deviations of the peak area were at most 2.2%. The adhered bacteria, either individual or in a mixture, were online analyzed by micellar electrokinetic chromatography and then collected from the capillary and off-line analyzed by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry without interfering matrix components.
ER  -

HORKA, Marie, Jiri SALPLACHTA, Pavel KARASEK, Filip RŮŽIČKA and Michal ROTH. Online Concentration of Bacteria from Tens of Microliter Sample Volumes in Roughened Fused Silica Capillary with Subsequent Analysis by Capillary Electrophoresis and Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry. \textit{ACS INFECTIOUS DISEASES}. WASHINGTON: AMER CHEMICAL SOC, 2020, vol.~6, No~3, p.~355-365. ISSN~2373-8227. Available from: https://dx.doi.org/10.1021/acsinfecdis.9b00200.

Detailed Information on Publication Record