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@inproceedings{1675380, author = {Troják, Matej and Šafránek, David and Brim, Luboš and Šalagovič, Jakub and Červený, Jan}, address = {Amsterdam}, booktitle = {9th International Workshop on Static Analysis and Systems Biology (SASB)}, doi = {http://dx.doi.org/10.1016/j.entcs.2020.06.006}, edition = {ENTCS 350}, editor = {Ankit Gupta, Tatjana Petrov}, keywords = {rule-based modelling; formal specification; static analysis}, howpublished = {elektronická verze "online"}, language = {eng}, location = {Amsterdam}, pages = {91-116}, publisher = {Elsevier}, title = {Executable Biochemical Space for Specification and Analysis of Biochemical Systems}, url = {https://doi.org/10.1016/j.entcs.2020.06.006}, year = {2020} }
TY - JOUR ID - 1675380 AU - Troják, Matej - Šafránek, David - Brim, Luboš - Šalagovič, Jakub - Červený, Jan PY - 2020 TI - Executable Biochemical Space for Specification and Analysis of Biochemical Systems PB - Elsevier CY - Amsterdam KW - rule-based modelling KW - formal specification KW - static analysis UR - https://doi.org/10.1016/j.entcs.2020.06.006 N2 - We present the second generation of a rule-based language called Biochemical Space Language (BCSL) that combines the advantages of different approaches and thus makes an effort to overcome several problems with existing solutions. The key aspect of the language is the level of abstraction it uses, which allows scalable and compact hierarchical specification of biochemical entities. This abstraction enables unique analysis techniques to reason about properties of models written in the language on the semantic and syntactic level. ER -
TROJÁK, Matej, David ŠAFRÁNEK, Luboš BRIM, Jakub ŠALAGOVIČ and Jan ČERVENÝ. Executable Biochemical Space for Specification and Analysis of Biochemical Systems. Online. In Ankit Gupta, Tatjana Petrov. \textit{9th International Workshop on Static Analysis and Systems Biology (SASB)}. ENTCS 350. Amsterdam: Elsevier, 2020, p.~91-116. ISSN~1571-0661. Available from: https://dx.doi.org/10.1016/j.entcs.2020.06.006.
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