SEHNAL, David, Radka SVOBODOVÁ, Karel BERKA, Alexander S. ROSE, Stephen K. BURLEY, Sameer VELANKAR and Jaroslav KOČA. High-performance macromolecular data delivery and visualization for the web. Acta Crystallographica Section D: Structural Biology. Chester: International Union of Crystallography, 2020, vol. 76, December 2020, p. 1167-1173. ISSN 2059-7983. Available from: https://dx.doi.org/10.1107/S2059798320014515.
Other formats:   BibTeX LaTeX RIS
Basic information
Original name High-performance macromolecular data delivery and visualization for the web
Authors SEHNAL, David (203 Czech Republic, guarantor, belonging to the institution), Radka SVOBODOVÁ (203 Czech Republic, belonging to the institution), Karel BERKA, Alexander S. ROSE, Stephen K. BURLEY, Sameer VELANKAR and Jaroslav KOČA (203 Czech Republic, belonging to the institution).
Edition Acta Crystallographica Section D: Structural Biology, Chester, International Union of Crystallography, 2020, 2059-7983.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 10608 Biochemistry and molecular biology
Country of publisher United Kingdom of Great Britain and Northern Ireland
Confidentiality degree is not subject to a state or trade secret
WWW URL
Impact factor Impact factor: 7.652
RIV identification code RIV/00216224:14740/20:00117882
Organization unit Central European Institute of Technology
Doi http://dx.doi.org/10.1107/S2059798320014515
UT WoS 000596508400002
Keywords in English data delivery; visualization; macromolecules; browser- based; web- based
Tags rivok
Tags International impact, Reviewed
Changed by Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 3/3/2021 14:28.
Abstract
Biomacromolecular structural data make up a vital and crucial scientific resource that has grown not only in terms of its amount but also in its size and complexity. Furthermore, these data are accompanied by large and increasing amounts of experimental data. Additionally, the macromolecular data are enriched with value-added annotations describing their biological, physicochemical and structural properties. Today, the scientific community requires fast and fully interactive web visualization to exploit this complex structural information. This article provides a survey of the available cutting-edge web services that address this challenge. Specifically, it focuses on data-delivery problems, discusses the visualization of a single structure, including experimental data and annotations, and concludes with a focus on the results of molecular-dynamics simulations and the visualization of structural ensembles.
Links
EF16_013/0001777, research and development projectName: ELIXIR-CZ: Budování kapacit
LM2018131, research and development projectName: Česká národní infrastruktura pro biologická data (Acronym: ELIXIR-CZ)
Investor: Ministry of Education, Youth and Sports of the CR, Czech National Infrastructure for Biological Data
PrintDisplayed: 23/7/2024 20:20