ROITHOVA, A., Zuzana FEKETOVÁ, Štěpánka VAŇÁČOVÁ and D. STANEK. DIS3L2 and LSm proteins are involved in the surveillance of Sm ring-deficient snRNAs. Nucleic acids research. Oxford: Oxford University Press, 2020, vol. 48, No 11, p. 6184-6197. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkaa301.
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Basic information
Original name DIS3L2 and LSm proteins are involved in the surveillance of Sm ring-deficient snRNAs
Authors ROITHOVA, A., Zuzana FEKETOVÁ (703 Slovakia, belonging to the institution), Štěpánka VAŇÁČOVÁ (203 Czech Republic, guarantor, belonging to the institution) and D. STANEK.
Edition Nucleic acids research, Oxford, Oxford University Press, 2020, 0305-1048.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 10608 Biochemistry and molecular biology
Country of publisher United Kingdom of Great Britain and Northern Ireland
Confidentiality degree is not subject to a state or trade secret
WWW URL
Impact factor Impact factor: 16.971
RIV identification code RIV/00216224:14740/20:00114751
Organization unit Central European Institute of Technology
Doi http://dx.doi.org/10.1093/nar/gkaa301
UT WoS 000574284500034
Keywords in English MESSENGER-RNA; DEGRADATION PATHWAY; NONCODING RNAS; TRANSLATION FACTORS; STRUCTURAL BASIS; TRUNCATED FORMS; QUALITY-CONTROL; CAJAL BODIES; CORE DOMAIN; COMPLEX
Tags rivok
Tags International impact, Reviewed
Changed by Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 26/2/2021 12:30.
Abstract
Spliceosomal small nuclear ribonucleoprotein particles (snRNPs) undergo a complex maturation pathway containing multiple steps in the nucleus and in the cytoplasm. snRNP biogenesis is strictly proof-read and several quality control checkpoints are placed along the pathway. Here, we analyzed the fate of small nuclear RNAs (snRNAs) that are unable to acquire a ring of Sm proteins. We showed that snRNAs lacking the Sm ring are unstable and accumulate in P-bodies in an LSm1-dependent manner. We further provide evidence that defective snRNAs without the Sm binding site are uridylated at the 3' end and associate with DIS3L2 3'-> 5' exoribonuclease and LSm proteins. Finally, inhibition of 5'-> 3' exoribonuclease XRN1 increases association of Delta Sm snRNAs with DIS3L2, which indicates competition and compensation between these two degradation enzymes. Together, we provide evidence that defective snRNAs without the Sm ring are uridylated and degraded by alternative pathways involving either DIS3L2 or LSm proteins and XRN1.
Links
GA16-21341S, research and development projectName: Studium úlohy uridylace RNA v lidských buňkách
Investor: Czech Science Foundation
GA20-19617S, research and development projectName: Molekulární mechanismy nekanonických 3' terminálních modifikací RNA a jejich úloha v metabolismu kódujících a nekódujících RNA
Investor: Czech Science Foundation
LM2015062, research and development projectName: Národní infrastruktura pro biologické a medicínské zobrazování
Investor: Ministry of Education, Youth and Sports of the CR
LQ1601, research and development projectName: CEITEC 2020 (Acronym: CEITEC2020)
Investor: Ministry of Education, Youth and Sports of the CR
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