Tidying-up the plant nuclear space: domains, functions, and
dynamics

J 2020

Tidying-up the plant nuclear space: domains, functions, and dynamics

SANTOS, A.P.; V. GAUDIN; I. MOZGOVA; F. PONTVIANNE; D. SCHUBERT et. al.

Basic information

Original name

Tidying-up the plant nuclear space: domains, functions, and dynamics

Authors

SANTOS, A.P.; V. GAUDIN; I. MOZGOVA; F. PONTVIANNE; D. SCHUBERT; A.L. TEK; Martina DVOŘÁČKOVÁ (203 Czech Republic, guarantor, belonging to the institution); C. LIU; P. FRANSZ; S. ROSA and S. FARRONA

Edition

Journal of Experimental Botany, Oxford, OXFORD UNIV PRESS, 2020, 0022-0957

Other information

Language

English

Type of outcome

Article in a journal

Field of Study

10611 Plant sciences, botany

Country of publisher

United Kingdom of Great Britain and Northern Ireland

Confidentiality degree

is not subject to a state or trade secret

References:

URL

Impact factor

Impact factor: 6.992

RIV identification code

RIV/00216224:14740/20:00118366

Organization unit

Central European Institute of Technology

DOI

https://doi.org/10.1093/jxb/eraa282

UT WoS

000573252000005

EID Scopus

2-s2.0-85096006285

Keywords in English

3D Chromatin organization; chromocentres; gene expression; liquid-liquid phase separation (LLPS); nuclear domains; nuclear bodies; nucleolus; nuclear periphery; telomeres; topologically associated domains (TADs)

Abstract

In the original language

Understanding how the packaging of chromatin in the nucleus is regulated and organized to guide complex cellular and developmental programmes, as well as responses to environmental cues is a major question in biology. Technological advances have allowed remarkable progress within this field over the last years. However, we still know very little about how the 3D genome organization within the cell nucleus contributes to the regulation of gene expression. The nuclear space is compartmentalized in several domains such as the nucleolus, chromocentres, telomeres, protein bodies, and the nuclear periphery without the presence of a membrane around these domains. The role of these domains and their possible impact on nuclear activities is currently under intense investigation. In this review, we discuss new data from research in plants that clarify functional links between the organization of different nuclear domains and plant genome function with an emphasis on the potential of this organization for gene regulation.

Cite

SANTOS, A.P.; V. GAUDIN; I. MOZGOVA; F. PONTVIANNE; D. SCHUBERT; A.L. TEK; Martina DVOŘÁČKOVÁ; C. LIU; P. FRANSZ; S. ROSA and S. FARRONA. Tidying-up the plant nuclear space: domains, functions, and dynamics. Journal of Experimental Botany. Oxford: OXFORD UNIV PRESS, 2020, vol. 71, No 17, p. 5160-5178. ISSN 0022-0957. Available from: https://doi.org/10.1093/jxb/eraa282.

@article{1751077,
   author = {Santos, A.P. and Gaudin, V. and Mozgova, I. and Pontvianne, F. and Schubert, D. and Tek, A.L. and Dvořáčková, Martina and Liu, C. and Fransz, P. and Rosa, S. and Farrona, S.},
   article_location = {Oxford},
   article_number = {17},
   doi = {https://doi.org/10.1093/jxb/eraa282},
   keywords = {3D Chromatin organization; chromocentres; gene expression; liquid-liquid phase separation (LLPS); nuclear domains; nuclear bodies; nucleolus; nuclear periphery; telomeres; topologically associated domains (TADs)},
   language = {eng},
   issn = {0022-0957},
   journal = {Journal of Experimental Botany},
   title = {Tidying-up the plant nuclear space: domains, functions, and dynamics},
   url = {https://academic.oup.com/jxb/article/71/17/5160/5859159},
   volume = {71},
   year = {2020}
}

TY  - JOUR
ID  - 1751077
AU  - Santos, A.P. - Gaudin, V. - Mozgova, I. - Pontvianne, F. - Schubert, D. - Tek, A.L. - Dvořáčková, Martina - Liu, C. - Fransz, P. - Rosa, S. - Farrona, S.
PY  - 2020
TI  - Tidying-up the plant nuclear space: domains, functions, and dynamics
JF  - Journal of Experimental Botany
VL  - 71
IS  - 17
SP  - 5160-5178
EP  - 5160-5178
PB  - OXFORD UNIV PRESS
SN  - 00220957
KW  - 3D Chromatin organization
KW  - chromocentres
KW  - gene expression
KW  - liquid-liquid phase separation (LLPS)
KW  - nuclear domains
KW  - nuclear bodies
KW  - nucleolus
KW  - nuclear periphery
KW  - telomeres
KW  - topologically associated domains (TADs)
UR  - https://academic.oup.com/jxb/article/71/17/5160/5859159
N2  - Understanding how the packaging of chromatin in the nucleus is regulated and organized to guide complex cellular and developmental programmes, as well as responses to environmental cues is a major question in biology. Technological advances have allowed remarkable progress within this field over the last years. However, we still know very little about how the 3D genome organization within the cell nucleus contributes to the regulation of gene expression. The nuclear space is compartmentalized in several domains such as the nucleolus, chromocentres, telomeres, protein bodies, and the nuclear periphery without the presence of a membrane around these domains. The role of these domains and their possible impact on nuclear activities is currently under intense investigation. In this review, we discuss new data from research in plants that clarify functional links between the organization of different nuclear domains and plant genome function with an emphasis on the potential of this organization for gene regulation.
ER  -

SANTOS, A.P.; V. GAUDIN; I. MOZGOVA; F. PONTVIANNE; D. SCHUBERT; A.L. TEK; Martina DVOŘÁČKOVÁ; C. LIU; P. FRANSZ; S. ROSA and S. FARRONA. Tidying-up the plant nuclear space: domains, functions, and dynamics. \textit{Journal of Experimental Botany}. Oxford: OXFORD UNIV PRESS, 2020, vol.~71, No~17, p.~5160-5178. ISSN~0022-0957. Available from: https://doi.org/10.1093/jxb/eraa282.

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