HOFROVÁ, Alena, Petr LOUŠA, Monika KUBÍČKOVÁ, Jozef HRITZ, Tomáš OTAŠEVIČ, Martin REPKO, Andrea KNIGHT and Martin PISKÁČEK. Universal two-point interaction of mediator KIX with 9aaTAD activation domains. Journal of cellular biochemistry. Hoboken (USA): WILEY-BLACKWELL, 2021, vol. 122, No 10, p. 1544-1555. ISSN 0730-2312. Available from: https://dx.doi.org/10.1002/jcb.30075.
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Basic information
Original name Universal two-point interaction of mediator KIX with 9aaTAD activation domains
Authors HOFROVÁ, Alena (203 Czech Republic, belonging to the institution), Petr LOUŠA (203 Czech Republic, belonging to the institution), Monika KUBÍČKOVÁ (203 Czech Republic, belonging to the institution), Jozef HRITZ (703 Slovakia, belonging to the institution), Tomáš OTAŠEVIČ (203 Czech Republic, belonging to the institution), Martin REPKO (203 Czech Republic, belonging to the institution), Andrea KNIGHT (203 Czech Republic, belonging to the institution) and Martin PISKÁČEK (40 Austria, belonging to the institution).
Edition Journal of cellular biochemistry, Hoboken (USA), WILEY-BLACKWELL, 2021, 0730-2312.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 10608 Biochemistry and molecular biology
Country of publisher United States of America
Confidentiality degree is not subject to a state or trade secret
WWW URL
Impact factor Impact factor: 4.480
RIV identification code RIV/00216224:14110/21:00120140
Organization unit Faculty of Medicine
Doi http://dx.doi.org/10.1002/jcb.30075
UT WoS 000669605600001
Keywords in English 9aaTAD; activation domain; E2A; KIX; MLL; p53
Tags 14110217, 14110518, podil, rivok
Tags International impact, Reviewed
Changed by Changed by: Mgr. Tereza Miškechová, učo 341652. Changed: 7/12/2021 13:47.
Abstract
The nine-amino-acid activation domain (9aaTAD) is defined by a short amino acid pattern including two hydrophobic regions (positions p3-4 and p6-7). The KIX domain of mediator transcription CBP interacts with the 9aaTAD domains of transcription factors MLL, E2A, NF-kB, and p53. In this study, we analyzed the 9aaTADs-KIX interactions by nuclear magnetic resonance. The positions of three KIX helixes alpha 1-alpha 2-alpha 3 are influenced by sterically-associated hydrophobic I611, L628, and I660 residues that are exposed to solvent. The positions of two rigid KIX helixes alpha 1 and alpha 2 generate conditions for structural folding in the flexible KIX-L12-G2 regions localized between them. The three KIX I611, L628, and I660 residues interact with two 9aaTAD hydrophobic residues in positions p3 and p4 and together build a hydrophobic core of five residues (5R). Numerous residues in 9aaTAD position p3 and p4 could provide this interaction. Following binding of the 9aaTAD to KIX, the hydrophobic I611, L628, and I660 residues are no longer exposed to solvent and their position changes inside the hydrophobic core together with position of KIX alpha 1-alpha 2-alpha 3 helixes. The new positions of the KIX helixes alpha 1 and alpha 2 allow the KIX-L12-G2 enhanced formation. The second hydrophobic region of the 9aaTAD (positions p6 and p7) provides strong binding with the KIX-L12-G2 region. Similarly, multiple residues in 9aaTAD position p6 and p7 could provide this interaction. In conclusion, both 9aaTAD regions p3, p4 and p6, p7 provide co-operative and highly universal binding to mediator KIX. The hydrophobic core 5R formation allows new positions of the rigid KIX alpha-helixes and enables the enhanced formation of the KIX-L12-G2 region. This contributes to free energy and is the key for the KIX-9aaTAD binding. Therefore, the 9aaTAD-KIX interactions do not operate under the rigid key-and-lock mechanism what explains the 9aaTAD natural variability.
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LTAUSA18168, research and development projectName: Selektivní NMR značení jako nástroj pro charakterizaci proteinových komplexů zapojených do neurodegenerativních onemocnění
Investor: Ministry of Education, Youth and Sports of the CR, Selective NMR labelling as a tool for characterization of protein complexes involved in neurodegenerative diseases., INTER-ACTION
NV19-05-00410, research and development projectName: Úloha cytotoxických gamma-delta T buněk na terapeutické rezistenci a recidivě Glioblastoma Multiforme
Investor: Ministry of Health of the CR
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